RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 IFNKQ9P0W0 207 aa21.01■□□□□ 0.95
SNX11-201ENST00000359238 M0R2N6 131 aa21■□□□□ 0.95
SNX11-201ENST00000359238 SMC2O95347 1197 aa21■□□□□ 0.95
SNX11-201ENST00000359238 CSRNP1Q96S65 589 aa21■□□□□ 0.95
SNX11-201ENST00000359238 ENTPD3O75355 529 aa21■□□□□ 0.95
SNX11-201ENST00000359238 PTPREP23469 700 aa21■□□□□ 0.95
SNX11-201ENST00000359238 NBPF9Q3BBW0 867 aa21■□□□□ 0.95
SNX11-201ENST00000359238 LONRF3Q496Y0 759 aa21■□□□□ 0.95
SNX11-201ENST00000359238 ISM2Q6H9L7 571 aa21■□□□□ 0.95
SNX11-201ENST00000359238 KRI1Q8N9T8 703 aaKnown RBP21■□□□□ 0.95
SNX11-201ENST00000359238 EXOC4Q96A65 974 aa21■□□□□ 0.95
SNX11-201ENST00000359238 SDF4Q9BRK5 362 aa21■□□□□ 0.95
SNX11-201ENST00000359238 ZCCHC17Q9NP64 241 aaKnown RBP21■□□□□ 0.95
SNX11-201ENST00000359238 GJA3Q9Y6H8 435 aa21■□□□□ 0.95
SNX11-201ENST00000359238 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
SNX11-201ENST00000359238 EGFRP00533 1210 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 CASQ1P31415 396 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 SLC16A2P36021 539 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 GPR161Q8N6U8 529 aaKnown RBP20.99■□□□□ 0.95
SNX11-201ENST00000359238 IQUBQ8NA54 791 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 CARD6Q9BX69 1037 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 CSRNP2Q9H175 543 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 YY1AP1Q9H869 796 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 LTBP3Q9NS15 1303 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 A0A087X0B3 334 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 BIN1O00499 593 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 URI1O94763 535 aaPredicted RBP20.99■□□□□ 0.95
SNX11-201ENST00000359238 SYKP43405 635 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 TNIP1Q15025 636 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 SPDYE2Q495Y8 402 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 RBM26Q5T8P6 1007 aaKnown RBP20.99■□□□□ 0.95
SNX11-201ENST00000359238 REXO1L1PQ8IX06 675 aa20.99■□□□□ 0.95
SNX11-201ENST00000359238 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.99■□□□□ 0.95
SNX11-201ENST00000359238 WNT10BO00744 389 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 CUTAO60888 179 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 TTLL1O95922 423 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 SEPT2Q15019 361 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 KCTD1Q719H9 257 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 BLIDQ8IZY5 108 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 SPZ1Q9BXG8 430 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 MYOZ2Q9NPC6 264 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 BARHL2Q9NY43 387 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 SNHG28P0DPA3 235 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 IL17AQ16552 155 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 CERKLQ49MI3 558 aaPredicted RBP20.98■□□□□ 0.95
SNX11-201ENST00000359238 ATRNL1Q5VV63 1379 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 FOXP4Q8IVH2 680 aaPredicted RBP20.98■□□□□ 0.95
SNX11-201ENST00000359238 EPSTI1Q96J88 318 aa20.98■□□□□ 0.95
SNX11-201ENST00000359238 TRIM75PA6NK02 468 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 PNOCQ13519 176 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 C10orf67Q8IYJ2 551 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 PDILTQ8N807 584 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 LCMT1Q9UIC8 334 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 PCDHA6Q9UN73 950 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 PCDHA4Q9UN74 947 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 PCDHA8Q9Y5H6 950 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 CNTNAP1P78357 1384 aa20.97■□□□□ 0.95
SNX11-201ENST00000359238 FAM237AA0A1B0GTK4 181 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 PPP1R11O60927 126 aaPredicted RBP20.96■□□□□ 0.95
SNX11-201ENST00000359238 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
SNX11-201ENST00000359238 GNAQP50148 359 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 TTC38Q5R3I4 469 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 SRLQ86TD4 932 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 METTL16Q86W50 562 aaKnown RBP20.96■□□□□ 0.95
SNX11-201ENST00000359238 GRAMD1CQ8IYS0 662 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 TMEM39BQ9GZU3 492 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 KCNH3Q9ULD8 1083 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 ZNF541Q9H0D2 1346 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 TRIM66O15016 1216 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 RAD21O60216 631 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 MCM7P33993 719 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 GMPSP49915 693 aaPredicted RBP20.96■□□□□ 0.95
SNX11-201ENST00000359238 PTGDRQ13258 359 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 TATDN1Q6P1N9 297 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 JMYQ8N9B5 988 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 COA7Q96BR5 231 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 ARFGAP3Q9NP61 516 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 KIAA1468Q9P260 1216 aa20.96■□□□□ 0.95
SNX11-201ENST00000359238 SRPRBQ9Y5M8 271 aaKnown RBP20.96■□□□□ 0.95
SNX11-201ENST00000359238 FANCGO15287 622 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 FCHSD1Q86WN1 690 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 RIOX1Q9H6W3 641 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 FZD9O00144 591 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 MTMR14Q8NCE2 650 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 TMX1Q9H3N1 280 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 BRMS1Q9HCU9 246 aa20.95■□□□□ 0.94
SNX11-201ENST00000359238 MYO1BO43795 1136 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 ZNF543Q08ER8 600 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 ZRSR1Q15695 479 aaKnown RBP20.94■□□□□ 0.94
SNX11-201ENST00000359238 INF2Q27J81 1249 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 MICALL2Q8IY33 904 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 FAM151AQ8WW52 585 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 ZBED3Q96IU2 234 aaPredicted RBP20.94■□□□□ 0.94
SNX11-201ENST00000359238 CCDC17Q96LX7 622 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 FUT8Q9BYC5 575 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 ADAM21Q9UKJ8 722 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 RRP15Q9Y3B9 282 aaKnown RBP20.94■□□□□ 0.94
SNX11-201ENST00000359238 SMCHD1A6NHR9 2005 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms