RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 DNAJC8O75937 253 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-202ENST00000358808 ATP5OP48047 213 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 VPS41P49754 854 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-202ENST00000358808 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLIP1-202ENST00000358808 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 FAM95CA0A1B0GW59 222 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.631e-6■■■■□ 26
CLIP1-202ENST00000358808 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 MORC4Q8TE76 937 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 LZTS2Q9BRK4 669 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 DISC1Q9NRI5 854 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-202ENST00000358808 SLC12A6Q9UHW9 1150 aa11.14□□□□□ -0.63
CLIP1-202ENST00000358808 MAGED2Q9UNF1 606 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-202ENST00000358808 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 TUBB2AQ13885 445 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 TRIM68Q6AZZ1 485 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 CCDC124Q96CT7 223 aaKnown RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 MMTAG2Q9BU76 263 aaKnown RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 TUBB2BQ9BVA1 445 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 PLEKHG3A1L390 1219 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 OCM2P0CE71 109 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 OCMP0CE72 109 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 POLGP54098 1239 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 NR1H4Q96RI1 486 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 TAF5LO75529 589 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 SYF2O95926 243 aaKnown RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 DLATP10515 647 aaKnown RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 ANO1Q5XXA6 986 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 RRAGAQ7L523 313 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 RFX6Q8HWS3 928 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 CFAP61Q8NHU2 1237 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 SBNO1A3KN83 1393 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 MTRQ99707 1265 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 AKT3Q9Y243 479 aa11.13□□□□□ -0.63
CLIP1-202ENST00000358808 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
CLIP1-202ENST00000358808 EYA2O00167 538 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SESN3P58005 492 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 NRBP2Q9NSY0 501 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 CLTCQ00610 1675 aaKnown RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 LRRIQ4A6NIV6 560 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ARHGAP6O43182 974 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 BFSP1Q12934 665 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 NEUROG2Q9H2A3 272 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 BLZF1Q9H2G9 400 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 NLRC4Q9NPP4 1024 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 KLHL14Q9P2G3 628 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 BAIAP2L1Q9UHR4 511 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 FIS1Q9Y3D6 152 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ARHGAP31Q2M1Z3 1444 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 EVI5O60447 810 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 BLVRAP53004 296 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 TFDP1Q14186 410 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 BRD3Q15059 726 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 RBM46Q8TBY0 533 aaKnown RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 GNA14O95837 355 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 A1BGP04217 495 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ZSCAN20P17040 1043 aaPredicted RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 EPHB1P54762 984 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ANGPTL8Q6UXH0 198 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SLC7A5P2Q9GIP4 190 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 NT5C3AQ9H0P0 336 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 H0YCG3 227 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SART1O43290 800 aaKnown RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 POLR2MP0CAP2 368 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SOX5P35711 763 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 YWHAGP61981 247 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 DMP1Q13316 513 aaPredicted RBP11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 ATP6V0A1Q93050 837 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CLIP1-202ENST00000358808 STAT1P42224 750 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 PDE1BQ01064 536 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 SZRD1Q7Z422 152 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 CDC42BPBQ9Y5S2 1711 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
CLIP1-202ENST00000358808 A6NNZ2 444 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms