RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SMARCC2Q8TAQ2 1214 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 WASF1Q92558 559 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
TPM1-206ENST00000358278 SMC3Q9UQE7 1217 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 ABCB11O95342 1321 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
TPM1-206ENST00000358278 hCG_1984214I3L0E3 225 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 PKN1Q16512 942 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 TKFCQ3LXA3 575 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 WWC2Q6AWC2 1192 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 ZNF713Q8N859 430 aaPredicted RBP17.58■□□□□ 0.41
TPM1-206ENST00000358278 JMYQ8N9B5 988 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 COA7Q96BR5 231 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 TRERF1Q96PN7 1200 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 RNF146Q9NTX7 359 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 TSKSQ9UJT2 592 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.41
TPM1-206ENST00000358278 RIPK3Q9Y572 518 aa17.58■□□□□ 0.41
TPM1-206ENST00000358278 ERCC3P19447 782 aa17.58■□□□□ 0.4
TPM1-206ENST00000358278 NAPAP54920 295 aa17.58■□□□□ 0.4
TPM1-206ENST00000358278 INTS4Q96HW7 963 aaKnown RBP17.58■□□□□ 0.4
TPM1-206ENST00000358278 PORCNQ9H237 461 aa17.58■□□□□ 0.4
TPM1-206ENST00000358278 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
TPM1-206ENST00000358278 MRPL11Q9Y3B7 192 aaKnown RBP17.58■□□□□ 0.4
TPM1-206ENST00000358278 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
TPM1-206ENST00000358278 LCTP09848 1927 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
TPM1-206ENST00000358278 FDPSP14324 419 aaKnown RBP17.57■□□□□ 0.4
TPM1-206ENST00000358278 SHCBP1Q8NEM2 672 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 CCDC12Q8WUD4 166 aaPredicted RBP17.57■□□□□ 0.4
TPM1-206ENST00000358278 MROH8Q9H579 483 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 BARHL2Q9NY43 387 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 FBXO40Q9UH90 709 aa17.57■□□□□ 0.4
TPM1-206ENST00000358278 GPR25O00155 361 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 STXBP3O00186 592 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 XBP1P17861 261 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 GJB2P29033 226 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 SP3Q02447 781 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 CHST13Q8NET6 341 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 AIFM3Q96NN9 605 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 EFCC1Q9HA90 598 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 ZNF236Q9UL36 1845 aa17.56■□□□□ 0.4
TPM1-206ENST00000358278 MAPK4P31152 587 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 KIF22Q14807 665 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 PPP1R18Q6NYC8 613 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 CCDC148Q8NFR7 591 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 IVNS1ABPQ9Y6Y0 642 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 NFIBO00712 420 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 FOSBP53539 338 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 LACTBP83111 547 aaPredicted RBP17.55■□□□□ 0.4
TPM1-206ENST00000358278 SH3GLB2Q9NR46 395 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
TPM1-206ENST00000358278 MCM3APO60318 1980 aa17.55■□□□□ 0.4
TPM1-206ENST00000358278 TRIM29Q14134 588 aa17.54■□□□□ 0.4
TPM1-206ENST00000358278 NOM1Q5C9Z4 860 aaKnown RBP17.54■□□□□ 0.4
TPM1-206ENST00000358278 TYW1BQ6NUM6 668 aa17.54■□□□□ 0.4
TPM1-206ENST00000358278 NSMFQ6X4W1 530 aa17.54■□□□□ 0.4
TPM1-206ENST00000358278 FKTNO75072 461 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 FCGRTP55899 365 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 PLEKHH3Q7Z736 793 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 MCF2L2Q86YR7 1114 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 ZNF296Q8WUU4 475 aaPredicted RBP17.53■□□□□ 0.4
TPM1-206ENST00000358278 CLEC4DQ8WXI8 215 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 MMP19Q99542 508 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 CENPFP49454 3210 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 MYH7BA7E2Y1 1941 aa17.53■□□□□ 0.4
TPM1-206ENST00000358278 PFASO15067 1338 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
TPM1-206ENST00000358278 CFBP00751 764 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 FCER1AP12319 257 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 PSMC4P43686 418 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 ADCY7P51828 1080 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 KCTD2Q14681 263 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 CUL5Q93034 780 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 PSTPIP2Q9H939 334 aa17.52■□□□□ 0.4
TPM1-206ENST00000358278 SMCO2A6NFE2 343 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 HSPA1AP0DMV8 641 aaKnown RBP17.52■□□□□ 0.39
TPM1-206ENST00000358278 HSPA1BP0DMV9 641 aaKnown RBP17.52■□□□□ 0.39
TPM1-206ENST00000358278 NLRP5P59047 1200 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 RNF207Q6ZRF8 634 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 FAM177A1Q8N128 213 aaPredicted RBP17.52■□□□□ 0.39
TPM1-206ENST00000358278 CD99L2Q8TCZ2 262 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 ERO1AQ96HE7 468 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 ARHGAP39Q9C0H5 1083 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 C6orf50Q9HD87 102 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 A1CFQ9NQ94 594 aaKnown RBP17.52■□□□□ 0.39
TPM1-206ENST00000358278 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.39
TPM1-206ENST00000358278 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 OPLAHO14841 1288 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 STRNO43815 780 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 GNA11P29992 359 aa17.51■□□□□ 0.39
TPM1-206ENST00000358278 ZMYND12Q9H0C1 365 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms