RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 EHD4Q9H223 541 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 CPSF2Q9P2I0 782 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 HPCAL4Q9UM19 191 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 STRCP1A6NGW2 1772 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SHTN1A0MZ66 631 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 GOLGA6BA6NDN3 693 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 TSPY2A6NKD2 308 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 PSMA7O14818 248 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 GOLGA6DP0CG33 693 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 FGFR2P21802 821 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 KRT83P78385 493 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC70Q6NSX1 233 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 PDXDC2PQ6P474 469 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 ANKRD18AQ8IVF6 992 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 FAM210AQ96ND0 272 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 GOLGA6AQ9NYA3 693 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 PHRF1Q9P1Y6 1649 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 MYO1FO00160 1098 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CYLC1P35663 651 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCNHP51946 323 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 MRPL12P52815 198 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CLNS1AP54105 237 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TROAPQ12815 778 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 KIF5AQ12840 1032 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 SPA17Q15506 151 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 SUSD4Q5VX71 490 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 COG1Q8WTW3 980 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC42Q96M95 316 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 NHEJ1Q9H9Q4 299 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CDHR2Q9BYE9 1310 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 SPEF2Q9C093 1822 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 ATRNO75882 1429 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TNS3Q68CZ2 1445 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 MYH8P13535 1937 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC194A0A1B0GVG4 234 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 H7C1D1 291 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 KIAA0754O94854 1291 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TUBBP07437 444 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 PLEKP08567 350 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 SCG2P13521 617 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CHRNDQ07001 517 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC181Q5TID7 509 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 WDR93Q6P2C0 686 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 WDR59Q6PJI9 974 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 DTHD1Q6ZMT9 781 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 OTUD6BQ8N6M0 293 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZNF483Q8TF39 744 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 HDAC7Q8WUI4 952 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 TATDN2Q93075 761 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 RUFY1Q96T51 708 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 FAM207AQ9NSI2 230 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 IRAK4Q9NWZ3 460 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 EHD2Q9NZN4 543 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 LRWD1Q9UFC0 647 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 SPATA31A3Q5VYP0 1347 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 MYO5AQ9Y4I1 1855 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 MST1RQ04912 1400 aa9.16□□□□□ -0.94
CDC42SE1-201ENST00000357235 LRRC10BA6NIK2 292 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 MCM3P25205 808 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 CKAP4Q07065 602 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 GRIK3Q13003 919 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 ENOX2Q16206 610 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 INF2Q27J81 1249 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZC3H12AQ5D1E8 599 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 IRF2BP1Q8IU81 584 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 RRP36Q96EU6 259 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 NOC4LQ9BVI4 516 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 KIF1AQ12756 1690 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 LGALS16A8MUM7 142 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 PSMD14O00487 310 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 GCKP35557 465 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 RNASE9P60153 205 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 FUT2Q10981 343 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 KCTD16Q68DU8 428 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 HEATR3Q7Z4Q2 680 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 C2CD5Q86YS7 1000 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 BCAS4Q8TDM0 211 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 KAT14Q9H8E8 782 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 SAMM50Q9Y512 469 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 ADAMTS7Q9UKP4 1686 aa9.15□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZEB2O60315 1214 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 CAND2O75155 1236 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 CYP2D6P10635 497 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 ASIC1P78348 528 aa9.15□□□□□ -0.95
CDC42SE1-201ENST00000357235 PDE4DQ08499 809 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms