RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TGFBRAP1Q8WUH2 860 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ZBTB7BO15156 539 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 GSTA4O15217 222 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 BATF3Q9NR55 127 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 DISC1Q9NRI5 854 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 FIS1Q9Y3D6 152 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 STAMQ92783 540 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 TAF5LO75529 589 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 PNMA6AP0CW24 399 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 PDE6BP35913 854 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 NRBF2Q96F24 287 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 FGFR1OP2Q9NVK5 253 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 TYW5A2RUC4 315 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 H7C1D1 291 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 XRCC5P13010 732 aaKnown RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 RCN2Q14257 317 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 FGD4Q96M96 766 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 PDE6CP51160 858 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 IGBP1P78318 339 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 ATP6V1E2Q96A05 226 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 APOL6Q9BWW8 343 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 SLC27A2O14975 620 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 SNX14Q9Y5W7 946 aa12.53□□□□□ -0.4
SPTBN1-202ENST00000356805 A6NJR5 290 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 KLHL29Q96CT2 875 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 YY1AP1Q9H869 796 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 PLCH2O75038 1416 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 PNOCQ13519 176 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 KRT33BQ14525 404 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 ARHGEF18Q6ZSZ5 1173 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 SGK1O00141 431 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 SYF2O95926 243 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 TIMM10P62072 90 aa12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 DMP1Q13316 513 aaPredicted RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.4
SPTBN1-202ENST00000356805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41e-6■■■■□ 20.8
SPTBN1-202ENST00000356805 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 DRP2Q13474 957 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 MAST3O60307 1309 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 K7ENM7 598 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 CCDC24Q8N4L8 307 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 EFHD1Q9BUP0 239 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 IFT122Q9HBG6 1241 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 CMA1P23946 247 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 STAT1P42224 750 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 TTC19Q6DKK2 380 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 NBPF3Q9H094 633 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 NPR1P16066 1061 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 HSPA6P17066 643 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 TAF11Q15544 211 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 GPBP1Q86WP2 473 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 KCNJ14Q9UNX9 436 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 SATB2Q9UPW6 733 aa12.52□□□□□ -0.41
SPTBN1-202ENST00000356805 GPAA1O43292 621 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 LMNB2Q03252 620 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 MAP3K7O43318 606 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 CLCN6P51797 869 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 NOP14P78316 857 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 UHMK1Q8TAS1 419 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 CSADQ9Y600 493 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 CSRNP1Q96S65 589 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 PASKQ96RG2 1323 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 CCDC92Q53HC0 331 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 MIS12Q9H081 205 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 KCNG1Q9UIX4 513 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 EPN1Q9Y6I3 576 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 H7C0C1 242 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 ATF2P15336 505 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 ATP5OP48047 213 aa12.51□□□□□ -0.41
SPTBN1-202ENST00000356805 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms