RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SLFN13Q68D06 897 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 RCSD1Q6JBY9 416 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 FAM160B2Q86V87 743 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 DGKHQ86XP1 1220 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 CD99L2Q8TCZ2 262 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 USB1Q9BQ65 265 aaKnown RBP4.66□□□□□ -1.66
CNOT4-202ENST00000356162 UBAC1Q9BSL1 405 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 PPP1R9AQ9ULJ8 1098 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 STX8Q9UNK0 236 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 RABGAP1Q9Y3P9 1069 aa4.66□□□□□ -1.66
CNOT4-202ENST00000356162 F5H6K3 240 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 TRIM66O15016 1216 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 NMT2O60551 498 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 CNMDO75829 334 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 FLOT1O75955 427 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 FDX1P10109 184 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 BMP3P12645 472 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 MCCP23508 829 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 RPIAP49247 311 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 FCGRTP55899 365 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 ERVK-9P63128 1117 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 ERVK-24P63145 666 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 LACTBP83111 547 aaPredicted RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 GUCA2AQ02747 115 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 KLRC3Q07444 240 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 SART3Q15020 963 aaKnown RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 PKN2Q16513 984 aaKnown RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 TSGA10IPQ3SY00 556 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 SPICE1Q8N0Z3 855 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 ENAHQ8N8S7 591 aaPredicted RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 ZSCAN10Q96SZ4 725 aaPredicted RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 P2RX7Q99572 595 aaKnown RBP4.65□□□□□ -1.66
CNOT4-202ENST00000356162 SLF1Q9BQI6 1058 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 TMEM47Q9BQJ4 181 aa4.65□□□□□ -1.66
CNOT4-202ENST00000356162 ERICH2A1L162 156 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 SNHG28P0DPA3 235 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 ZKSCAN1P17029 563 aaPredicted RBP4.65□□□□□ -1.67
CNOT4-202ENST00000356162 HSPA4P34932 840 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 SLC1A4P43007 532 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 ANTXR2P58335 489 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 CCNA1P78396 465 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PRR20EP86478 221 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PRR20CP86479 221 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PRR20DP86480 221 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PRR20BP86481 221 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PRR20AP86496 221 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 COG2Q14746 738 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 SEC23AQ15436 765 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 CCDC96Q2M329 555 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 IFIT1BQ5T764 474 aaKnown RBP4.65□□□□□ -1.67
CNOT4-202ENST00000356162 CYB5R4Q7L1T6 521 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 OTOP1Q7RTM1 612 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 PARP9Q8IXQ6 854 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 ANKRD13CQ8N6S4 541 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 SHCBP1Q8NEM2 672 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 GPRC5AQ8NFJ5 357 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 ATG4CQ96DT6 458 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 TMEM87BQ96K49 555 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 KAT14Q9H8E8 782 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 HOXC10Q9NYD6 342 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 TAF6LQ9Y6J9 622 aa4.65□□□□□ -1.67
CNOT4-202ENST00000356162 SH2B2O14492 632 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 IFIT3O14879 490 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PRC1O43663 620 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 RAD21O60216 631 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 GDF9O60383 454 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 DXOO77932 396 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 DDAH1O94760 285 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PDHBP11177 359 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 HOXD10P28358 340 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 MAPK4P31152 587 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 MCM5P33992 734 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 STAT2P52630 851 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 OAZ1P54368 228 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 WTAPQ15007 396 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ASPRV1Q53RT3 343 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 GPATCH4Q5T3I0 446 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 FBXO46Q6PJ61 603 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 BTNL9Q6UXG8 535 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PNMA1Q8ND90 353 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 REPS2Q8NFH8 660 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 CHURC1Q8WUH1 139 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SPIRE2Q8WWL2 714 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SOCS4Q8WXH5 440 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 NUP88Q99567 741 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ZKSCAN3Q9BRR0 538 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PAGR1Q9BTK6 254 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 EFCC1Q9HA90 598 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 TXNRD2Q9NNW7 524 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ZSWIM5Q9P217 1185 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ADAMTS5Q9UNA0 930 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 TRIM17Q9Y577 477 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 LRRC37A2A6NM11 1700 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ATP2A1O14983 1001 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 SLC25A27O95847 323 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 HMGB1P09429 215 aaKnown RBP4.64□□□□□ -1.67
CNOT4-202ENST00000356162 PSMC4P43686 418 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 ZNF543Q08ER8 600 aa4.64□□□□□ -1.67
CNOT4-202ENST00000356162 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms