RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 MDM2Q00987 491 aaPredicted RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 LPAR1Q92633 364 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 NAP1L4Q99733 375 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 DNAJC25Q9H1X3 360 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 ADARB2Q9NS39 739 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 GGA3Q9NZ52 723 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 SERTAD1Q9UHV2 236 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 NEMFO60524 1076 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 DDNO94850 711 aaPredicted RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 ZNF165P49910 485 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 NLRP12P59046 1061 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 ZRSR1Q15695 479 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 UBE2SQ16763 222 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 PDLIM2Q96JY6 352 aa25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 GLIS2Q9BZE0 524 aaPredicted RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 RANBP17Q9H2T7 1088 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 POLR2AP24928 1970 aaKnown RBP25.92■■□□□ 1.74
SCAMP3-202ENST00000355379 OR52Z1P0C646 297 aa25.92■■□□□ 1.74
SCAMP3-202ENST00000355379 AP3B2Q13367 1082 aa25.92■■□□□ 1.74
SCAMP3-202ENST00000355379 PPP4R3AQ6IN85 833 aa25.92■■□□□ 1.74
SCAMP3-202ENST00000355379 FEZ1Q99689 392 aa25.92■■□□□ 1.74
SCAMP3-202ENST00000355379 WDR46O15213 610 aaKnown RBP25.91■■□□□ 1.74
SCAMP3-202ENST00000355379 C9orf131Q5VYM1 1079 aa25.91■■□□□ 1.74
SCAMP3-202ENST00000355379 SCYL3Q8IZE3 742 aa25.91■■□□□ 1.74
SCAMP3-202ENST00000355379 AK8Q96MA6 479 aa25.91■■□□□ 1.74
SCAMP3-202ENST00000355379 WDR18Q9BV38 432 aa25.91■■□□□ 1.74
SCAMP3-202ENST00000355379 EDIL3O43854 480 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 SLFN14P0C7P3 912 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 GCFC2P16383 781 aaKnown RBP25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 INPP5BP32019 993 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 TXLNAP40222 546 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 SNAP25P60880 206 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 ZYXQ15942 572 aaKnown RBP25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 SUPT20HL1Q3ZLR7 823 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 ERCC4Q92889 916 aaPredicted RBP25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 NAT10Q9H0A0 1025 aaKnown RBP25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 PHIPQ8WWQ0 1821 aa25.9■■□□□ 1.74
SCAMP3-202ENST00000355379 A0A087X0B3 334 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 MEIS2O14770 477 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 PNOCQ13519 176 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 POSTNQ15063 836 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 C11orf57Q6ZUT1 292 aaPredicted RBP25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 CCDC84Q86UT8 332 aaPredicted RBP25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 CEP57L1Q8IYX8 460 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 PDILTQ8N807 584 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 BPIFA3Q9BQP9 254 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 AS3MTQ9HBK9 375 aa25.89■■□□□ 1.74
SCAMP3-202ENST00000355379 FOSP01100 380 aaPredicted RBP25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 IQCB1Q15051 598 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 NT5DC1Q5TFE4 455 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 SH3RF1Q7Z6J0 888 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 IQUBQ8NA54 791 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 DHX58Q96C10 678 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 CCSER1Q9C0I3 900 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 USP11P51784 963 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 USP14P54578 494 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 KIFC2Q96AC6 838 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 MTMR9Q96QG7 549 aa25.88■■□□□ 1.73
SCAMP3-202ENST00000355379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 SSC5DA1L4H1 1573 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L15C9J2P7 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L13C9JLJ4 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L11C9JVI0 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L18D6R9N7 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L22D6RA61 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L17D6RBQ6 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L19D6RCP7 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L20D6RJB6 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 PIK3CDO00329 1044 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L24Q0WX57 530 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 E2F4Q16254 413 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USH1GQ495M9 461 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 NOL9Q5SY16 702 aaKnown RBP25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 USP17L6PQ6QN14 398 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 MOXD1Q6UVY6 613 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 LUZP1Q86V48 1076 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 WRNIP1Q96S55 665 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 ANO3Q9BYT9 981 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 PCDHA5Q9Y5H7 936 aa25.87■■□□□ 1.73
SCAMP3-202ENST00000355379 SARSP49591 514 aaKnown RBP25.86■■□□□ 1.73
SCAMP3-202ENST00000355379 CALCRLQ16602 461 aa25.86■■□□□ 1.73
SCAMP3-202ENST00000355379 POTEDQ86YR6 584 aa25.86■■□□□ 1.73
SCAMP3-202ENST00000355379 KLRG1Q96E93 195 aa25.86■■□□□ 1.73
SCAMP3-202ENST00000355379 PICK1Q9NRD5 415 aa25.86■■□□□ 1.73
SCAMP3-202ENST00000355379 TDP2O95551 362 aa25.85■■□□□ 1.73
SCAMP3-202ENST00000355379 TRIML1Q8N9V2 468 aa25.85■■□□□ 1.73
SCAMP3-202ENST00000355379 SPATA20Q8TB22 786 aa25.85■■□□□ 1.73
SCAMP3-202ENST00000355379 ABCB11O95342 1321 aa25.85■■□□□ 1.73
SCAMP3-202ENST00000355379 PARP14Q460N5 1801 aa25.85■■□□□ 1.73
SCAMP3-202ENST00000355379 CYP3A7-CYP3A51PA0A087WV96 503 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 OPLAHO14841 1288 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 FOXN1O15353 648 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 PTPRAP18433 802 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 CYP3A7P24462 503 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 FXR2P51116 673 aaKnown RBP eCLIP25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 PRAMEF18Q5VWM3 479 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 DPY19L2Q6NUT2 758 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 PRPF38AQ8NAV1 312 aaKnown RBP25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 CRYGNQ8WXF5 182 aa25.84■■□□□ 1.73
SCAMP3-202ENST00000355379 SMARCE1Q969G3 411 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms