RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 BUB1O43683 1085 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 THOC5Q13769 683 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 UHMK1Q8TAS1 419 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 KCNJ14Q9UNX9 436 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SLC8A2Q9UPR5 921 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 EEF1B2P24534 225 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ACBD5Q5T8D3 534 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 TMTC3Q6ZXV5 915 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 DDX25Q9UHL0 483 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MTHFSDQ2M296 383 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 OR8K1Q8NGG5 319 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ATP6V0A1Q93050 837 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PLEKHG3A1L390 1219 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 EIF3CLB5ME19 914 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 KCNJ18B7U540 433 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 EYA2O00167 538 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 RNASELQ05823 741 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 KCNJ12Q14500 433 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 EIF3CQ99613 913 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 MYL10Q9BUA6 226 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TFAP4Q01664 338 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ZSCAN26Q16670 478 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TRMT44Q8IYL2 757 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 STK25O00506 426 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 XKR9Q5GH70 373 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 STAMQ92783 540 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 CCDC51Q96ER9 411 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 RUNDC3BQ96NL0 473 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 EEF1DP29692 281 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 NCAPG2Q86XI2 1143 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 OTUD7BQ6GQQ9 843 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ANGPTL8Q6UXH0 198 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 DNAAF3Q8N9W5 541 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PCDHA12Q9UN75 941 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PASKQ96RG2 1323 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ALDH1B1P30837 517 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 LRRD1A4D1F6 860 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 CPP00450 1065 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ADKP55263 362 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 LMNB2Q03252 620 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 BTG4Q9NY30 223 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ARMCX3Q9UH62 379 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM47AQ5JRC9 791 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 DPY19L2Q6NUT2 758 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PNOCQ13519 176 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM149B1Q96BN6 582 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 RNMTO43148 476 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 SNX25Q9H3E2 840 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 DCTPP1Q9H773 170 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 POLR2FP61218 127 aaKnown RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ADGRL1O94910 1474 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 FBXL13Q8NEE6 735 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 NR1H4Q96RI1 486 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 H3BRJ5 948 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PEX19P40855 299 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 SCYL3Q8IZE3 742 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ANLNQ9NQW6 1124 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 SZRD1Q7Z422 152 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 LRFN2Q9ULH4 789 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TAF5LO75529 589 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ATP2B4P23634 1241 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 PIP4K2CQ8TBX8 421 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 DPH5Q9H2P9 285 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 BRD3Q15059 726 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 SNCBQ16143 134 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 DPP9Q86TI2 863 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIML1Q8N9V2 468 aa6.3□□□□□ -1.4
SRGAP1-201ENST00000355086 ZBBXA8MT70 800 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SPATA5Q8NB90 893 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 LZICQ8WZA0 190 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 CCDC127Q96BQ5 260 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TMEM247A6NEH6 219 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 MCF2LO15068 1137 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 AP5M1Q9H0R1 490 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 NRBP2Q9NSY0 501 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ARHGEF11O15085 1522 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 PLBD2Q8NHP8 589 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 FIS1Q9Y3D6 152 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SNAPC4Q5SXM2 1469 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TRPA1O75762 1119 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 ARHGDIAP52565 204 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 AOC3Q16853 763 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 DCAF15Q66K64 600 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 SPATS2Q86XZ4 545 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 C14orf93Q9H972 538 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 EXOC3L4Q17RC7 722 aa6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 TRMT10CQ7L0Y3 403 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-201ENST00000355086 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms