RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 KRT26Q7Z3Y9 468 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 TTYH3Q9C0H2 523 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 SH2D4AQ9H788 454 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 ZNHIT6Q9NWK9 470 aaKnown RBP8.72□□□□□ -1.01
CD46-203ENST00000354848 MYH6P13533 1939 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 RICTORQ6R327 1708 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 XDHP47989 1333 aa8.72□□□□□ -1.01
CD46-203ENST00000354848 NUTM2BA6NNL0 878 aaPredicted RBP8.71□□□□□ -1.01
CD46-203ENST00000354848 NUTM2EB1AL46 878 aaPredicted RBP8.71□□□□□ -1.01
CD46-203ENST00000354848 FKBP4Q02790 459 aaKnown RBP eCLIP8.71□□□□□ -1.01
CD46-203ENST00000354848 SNX1Q13596 522 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 THEMIS2Q5TEJ8 643 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.01
CD46-203ENST00000354848 NFXL1Q6ZNB6 911 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 TBC1D10CQ8IV04 446 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 BORCS6Q96GS4 357 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 ZNF570Q96NI8 536 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 LAMB4A4D0S4 1761 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 PXDNQ92626 1479 aa8.71□□□□□ -1.01
CD46-203ENST00000354848 GOLGA6L10A6NI86 522 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 NCK2O43639 380 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 MYL6BP14649 208 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 TRAF1Q13077 416 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 ARMC9Q7Z3E5 817 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 OXER1Q8TDS5 423 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 TCP11Q8WWU5 503 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 RAPGEF5Q92565 580 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.71□□□□□ -1.022e-10■■■□□ 19.2
CD46-203ENST00000354848 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 PDS5AQ29RF7 1337 aaKnown RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 RGPD2P0DJD1 1756 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 TRIM49BA6NDI0 452 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 B4E1Z4 1266 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 USO1O60763 962 aaKnown RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 TRIM21P19474 475 aaKnown RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 RAB27AP51159 221 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 RPS6KA3P51812 740 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 RIPK1Q13546 671 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 IGDCC4Q8TDY8 1250 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 CASKIN2Q8WXE0 1202 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 WASF1Q92558 559 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 MS4A14Q96JA4 679 aa8.71□□□□□ -1.02
CD46-203ENST00000354848 CORO1CQ9ULV4 474 aaPredicted RBP8.71□□□□□ -1.02
CD46-203ENST00000354848 FER1L4A9Z1Z3 1794 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 RASSF10A6NK89 507 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 PHF20L1A8MW92 1017 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 H7C1D1 291 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 H7C1W4 665 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 GCOM1H8Y6P7 765 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 CLTAP09496 248 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 MYZAPP0CAP1 466 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 SLMAPQ14BN4 828 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 SPA17Q15506 151 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 TRADDQ15628 312 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 L3MBTL3Q96JM7 780 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 YIPF3Q9GZM5 350 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 TAF1DQ9H5J8 278 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 LY9Q9HBG7 655 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 GPR108Q9NPR9 543 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 PLCB1Q9NQ66 1216 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 IRAK4Q9NWZ3 460 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 CNOT8Q9UFF9 292 aaKnown RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 MYH7BA7E2Y1 1941 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 LTN1O94822 1766 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 MYH1P12882 1939 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 ERICH2A1L162 156 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 GPAA1O43292 621 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 TRIM37O94972 964 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 PLEKP08567 350 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 PAEPP09466 180 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 IFNAR1P17181 557 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 HSPA9P38646 679 aaKnown RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 PRCPP42785 496 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 KLK7P49862 253 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 ZBED6P86452 979 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 ZNF658Q5TYW1 1059 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 CPLX4Q7Z7G2 160 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 PNMA8AQ86V59 439 aaPredicted RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 SGMS1Q86VZ5 419 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 CCDC63Q8NA47 563 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 OR2W6PQ8NHA6 318 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 CCHCR1Q8TD31 782 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 AGAP11Q8TF27 550 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 TMEM87BQ96K49 555 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 CCDC42Q96M95 316 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 ALS2CR12Q96Q35 445 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
CD46-203ENST00000354848 NDST4Q9H3R1 872 aa8.7□□□□□ -1.02
CD46-203ENST00000354848 GDAQ9Y2T3 454 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms