RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SRGAP2O75044 1071 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CTAGE8P0CG41 777 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 PICALMQ13492 652 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CTAGE6Q86UF2 777 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CTAGE4Q8IX94 777 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 NEK11Q8NG66 645 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CAPZA3Q96KX2 299 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 RTFDC1Q9BY42 306 aaPredicted RBP21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CCSER1Q9C0I3 900 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 KIAA1551Q9HCM1 1747 aa21.92■■□□□ 1.1
COL13A1-201ENST00000354547 CCDC88AQ3V6T2 1871 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 USP17L5A8MUK1 530 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 RHOBTB3O94955 611 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 LDHCP07864 332 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 CCDC122Q5T0U0 273 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 TTI2Q6NXR4 508 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 POTEDQ86YR6 584 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 RRP36Q96EU6 259 aaKnown RBP21.91■■□□□ 1.1
COL13A1-201ENST00000354547 DUSP9Q99956 384 aaKnown RBP21.91■■□□□ 1.1
COL13A1-201ENST00000354547 F8W031 263 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-201ENST00000354547 KIAA1328Q86T90 577 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 RPGRQ92834 1020 aaKnown RBP21.91■■□□□ 1.1
COL13A1-201ENST00000354547 COA7Q96BR5 231 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 MYO6Q9UM54 1294 aa21.91■■□□□ 1.1
COL13A1-201ENST00000354547 COL5A3P25940 1745 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-201ENST00000354547 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 WDR59Q6PJI9 974 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 DYMQ7RTS9 669 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 TRIM9Q9C026 710 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 C6orf50Q9HD87 102 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 ABCB6Q9NP58 842 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 LEMD3Q9Y2U8 911 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 CCDC151A5D8V7 595 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 FECHP22830 423 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 CYP27A1Q02318 531 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 KCNB1Q14721 858 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 FAM196AQ6ZSG2 479 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 ZNF507Q8TCN5 953 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 CNOT6LQ96LI5 555 aaKnown RBP21.9■■□□□ 1.1
COL13A1-201ENST00000354547 ZMYND12Q9H0C1 365 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 LAMB1P07942 1786 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 EEF1GP26641 437 aaKnown RBP21.9■■□□□ 1.1
COL13A1-201ENST00000354547 MFSD14BQ5SR56 506 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 RC3H1Q5TC82 1133 aaKnown RBP21.9■■□□□ 1.1
COL13A1-201ENST00000354547 NEK8Q86SG6 692 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 LRRC47Q8N1G4 583 aaKnown RBP21.9■■□□□ 1.1
COL13A1-201ENST00000354547 CD209Q9NNX6 404 aa21.9■■□□□ 1.1
COL13A1-201ENST00000354547 COL22A1Q8NFW1 1626 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-201ENST00000354547 VSNL1P62760 191 aa21.89■■□□□ 1.1
COL13A1-201ENST00000354547 P2RX5Q93086 422 aa21.89■■□□□ 1.1
COL13A1-201ENST00000354547 THAP9Q9H5L6 903 aa21.89■■□□□ 1.1
COL13A1-201ENST00000354547 FLT1P17948 1338 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 KRT25Q7Z3Z0 450 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 DAGLBQ8NCG7 672 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 NOC4LQ9BVI4 516 aaKnown RBP21.89■■□□□ 1.09
COL13A1-201ENST00000354547 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 PDE11AQ9HCR9 933 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 NRAPQ86VF7 1730 aa21.89■■□□□ 1.09
COL13A1-201ENST00000354547 H3BQF6 201 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 PPP4CP60510 307 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 HERVK_113P62684 666 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 CCDC47Q96A33 483 aaKnown RBP21.88■■□□□ 1.09
COL13A1-201ENST00000354547 HINFPQ9BQA5 517 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 DUSP10Q9Y6W6 482 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 AHDC1Q5TGY3 1603 aaPredicted RBP21.88■■□□□ 1.09
COL13A1-201ENST00000354547 BRD3Q15059 726 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 GALNT17Q6IS24 598 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 GJA10Q969M2 543 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 GPCPD1Q9NPB8 672 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 CAPN11Q9UMQ6 739 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 EP400Q96L91 3159 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 MACROD2A1Z1Q3 448 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 ADRA2BP18089 450 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 GNA11P29992 359 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 DNM2P50570 870 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 ZNF287Q9HBT7 754 aa21.88■■□□□ 1.09
COL13A1-201ENST00000354547 ATP8B1O43520 1251 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 ATP1A1P05023 1023 aaKnown RBP21.87■■□□□ 1.09
COL13A1-201ENST00000354547 IDEP14735 1019 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 REXO1Q8N1G1 1221 aaKnown RBP21.87■■□□□ 1.09
COL13A1-201ENST00000354547 C6orf229H3BNL8 230 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 CCNE1P24864 410 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 CYP2C19P33261 490 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 ATP2B2Q01814 1243 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 TRERF1Q96PN7 1200 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 LACRTQ9GZZ8 138 aa21.87■■□□□ 1.09
COL13A1-201ENST00000354547 RCCD1A6NED2 376 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 RAD21O60216 631 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 BEND6Q5SZJ8 279 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-201ENST00000354547 CALML4Q96GE6 196 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 DNAJC7Q99615 494 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 MMTAG2Q9BU76 263 aaKnown RBP21.86■■□□□ 1.09
COL13A1-201ENST00000354547 SPZ1Q9BXG8 430 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 ZNHIT6Q9NWK9 470 aaKnown RBP21.86■■□□□ 1.09
COL13A1-201ENST00000354547 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-201ENST00000354547 POTEMA6NI47 508 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 LAD1O00515 517 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 RIMBP2O15034 1052 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 C16orf86Q6ZW13 317 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms