RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 C4orf46Q504U0 113 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 NBPF12Q5TAG4 269 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 MBLAC2Q68D91 279 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 HDGFL2Q7Z4V5 671 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 TRIM59Q8IWR1 403 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SLC16A10Q8TF71 515 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 TGFBRAP1Q8WUH2 860 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CHTF18Q8WVB6 975 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 GATA6Q92908 595 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SLC2A13Q96QE2 648 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 TTC1Q99614 292 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 MRPL4Q9BYD3 311 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 EMC7Q9NPA0 242 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 C14orf119Q9NWQ9 140 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 GFOD1Q9NXC2 390 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SAMD15Q9P1V8 674 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 EDARQ9UNE0 448 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SLC12A7Q9Y666 1083 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 IQCA1LA6NCM1 817 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 WASH4PA8MWX3 477 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 FAM229AH3BQW9 127 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 F2P00734 622 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 PYGMP11217 842 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 IFNGR1P15260 489 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SUMO1P63165 101 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 DSG1Q02413 1049 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 NEUROD1Q13562 356 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 ZCCHC8Q6NZY4 707 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SPATS2Q86XZ4 545 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 FIBCD1Q8N539 461 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 GALNT6Q8NCL4 622 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CHMP4CQ96CF2 233 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SMOC1Q9H4F8 434 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 OBP2AQ9NY56 170 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CRIM1Q9NZV1 1036 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 NESP48681 1621 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 AGRPO00253 132 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 TIAF1O95411 115 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SNRPB2P08579 225 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 BPIP17213 487 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CTSKP43235 329 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 IL2P60568 153 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 PIP4K2BP78356 416 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SCRN1Q12765 414 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CRTC3Q6UUV7 619 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CATIPQ7Z7H3 387 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 ALYREFQ86V81 257 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CCAR1Q8IX12 1150 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 MRPL41Q8IXM3 137 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 PPM1KQ8N3J5 372 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 CISD2Q8N5K1 135 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SMC1BQ8NDV3 1235 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 EDARADDQ8WWZ3 215 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 USP7Q93009 1102 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 VWCEQ96DN2 955 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 EPN3Q9H201 632 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 INTS7Q9NVH2 962 aaKnown RBP2.14□□□□□ -2.07
BRCA1-202ENST00000354071 ERCC6Q03468 1493 aa2.14□□□□□ -2.07
BRCA1-202ENST00000354071 SPDYE3A6NKU9 549 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PIP5K1CO60331 668 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 YBX3P16989 372 aaKnown RBP eCLIP2.13□□□□□ -2.077e-6■■■□□ 18.9
BRCA1-202ENST00000354071 IGFALSP35858 605 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MAP2K3P46734 347 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SCAND1P57086 179 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 TUBB8Q3ZCM7 444 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ERAP2Q6P179 960 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CD163Q86VB7 1156 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 TCEAL8Q8IYN2 117 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 KREMEN2Q8NCW0 462 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 WNK4Q96J92 1243 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 DCAF5Q96JK2 942 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 APOL5Q9BWW9 433 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PRDM14Q9GZV8 571 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 KRT82Q9NSB4 513 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ZFHX4Q86UP3 3567 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 KIF3BO15066 747 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ALX3O95076 343 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ZRANB2O95218 330 aaKnown RBP eCLIP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FKBP9O95302 570 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 MYL1P05976 194 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 THBDP07204 575 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ASGR2P07307 311 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ATP2A2P16615 1042 aaKnown RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 POU3F2P20265 443 aaPredicted RBP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 GUCY1A3Q02108 690 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ID3Q02535 119 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 INAVAQ3KP66 663 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PLA2G4EQ3MJ16 856 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 SLC35F1Q5T1Q4 408 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CREB3L3Q68CJ9 461 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 IQSEC1Q6DN90 963 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 XRRA1Q6P2D8 792 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FKBP9P1Q75LS8 142 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 ARMCX6Q7L4S7 300 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 DNAJB8Q8NHS0 232 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CYB5D2Q8WUJ1 264 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 FUBP3Q96I24 572 aaKnown RBP eCLIP2.13□□□□□ -2.07
BRCA1-202ENST00000354071 CCDC74BQ96LY2 380 aa2.13□□□□□ -2.07
BRCA1-202ENST00000354071 PSMG3-AS1Q96PY0 264 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms