RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ANLNQ9NQW6 1124 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 CLIC2O15247 247 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 PRPSAP1Q14558 356 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 LPIN2Q92539 896 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 GJA10Q969M2 543 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 SLC7A5P2Q9GIP4 190 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 CTSWP56202 376 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 APPBP2Q92624 585 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 LRRN2O75325 713 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 CD58P19256 250 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 SSTR3P32745 418 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 LGSNQ5TDP6 509 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 LMNTD2Q8IXW0 634 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 RASGRP4Q8TDF6 673 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 N4BP2L2Q92802 583 aaPredicted RBP10.94□□□□□ -0.66
COL11A1-201ENST00000353414 HAUS1Q96CS2 278 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 AMFRQ9UKV5 643 aa10.94□□□□□ -0.66
COL11A1-201ENST00000353414 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF277Q9NRM2 450 aaPredicted RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 C1orf112Q9NSG2 853 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 BAG5Q9UL15 447 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 SNX14Q9Y5W7 946 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 OSBPP22059 807 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 UBE2Q2Q8WVN8 375 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 CLIC6Q96NY7 704 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 IFIH1Q9BYX4 1025 aaKnown RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 GNGT2O14610 69 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 XRCC5P13010 732 aaKnown RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 STX2P32856 288 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 SOX5P35711 763 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ANKRD20A3Q5VUR7 823 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 KRIT1O00522 736 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ACTN1P12814 892 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 TFAMQ00059 246 aaKnown RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ABCB5Q2M3G0 1257 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 KRT71Q3SY84 523 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 RWDD4Q6NW29 188 aaKnown RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 KRT25Q7Z3Z0 450 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 FAM178BQ8IXR5 827 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 CSRNP1Q96S65 589 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 RASSF4Q9H2L5 321 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ICA1Q05084 483 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 MESDQ14696 234 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 PALD1Q9ULE6 856 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 PARP10Q53GL7 1025 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 USPL1Q5W0Q7 1092 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 METTL23Q86XA0 190 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 NLRP4Q96MN2 994 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 TEKT3Q9BXF9 490 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
COL11A1-201ENST00000353414 DDX41Q9UJV9 622 aaKnown RBP10.93□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF518AQ6AHZ1 1483 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 MAP3K1Q13233 1512 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 WDR91A4D1P6 747 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 YWHAGP61981 247 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 TMEM87BQ96K49 555 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 KCNQ3O43525 872 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 BLVRAP53004 296 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 NOP14P78316 857 aaKnown RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 IP6K1Q92551 441 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 TRIP13Q15645 432 aaPredicted RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 HADHQ16836 314 aaKnown RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 MTERF2Q49AM1 385 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 TTLL7Q6ZT98 887 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 HSPH1Q92598 858 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 MMTAG2Q9BU76 263 aaKnown RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 BAIAP2L1Q9UHR4 511 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF148Q9UQR1 794 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 CEP128Q6ZU80 1094 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 KCTD17Q8N5Z5 321 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 VCXQ9H320 206 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 HEXIM1O94992 359 aaKnown RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 IRX4P78413 519 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
COL11A1-201ENST00000353414 PPP2R5EQ16537 467 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 HPS4Q9NQG7 708 aa10.92□□□□□ -0.66
COL11A1-201ENST00000353414 E7EWF7 191 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 EPHB1P54762 984 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 LRRC41Q15345 812 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 DNAAF3Q8N9W5 541 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 INTUQ9ULD6 942 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 AK9Q5TCS8 1911 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 HNRNPCL2B2RXH8 293 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms