RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 GRIK5Q16478 980 aa17.37■□□□□ 0.37
TNFSF13-202ENST00000349228 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
TNFSF13-202ENST00000349228 SLC44A5Q8NCS7 719 aa17.37■□□□□ 0.37
TNFSF13-202ENST00000349228 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
TNFSF13-202ENST00000349228 TUBBP07437 444 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 ZNF569Q5MCW4 686 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 FAM196AQ6ZSG2 479 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 AMIGO3Q86WK7 504 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 ZNF507Q8TCN5 953 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 TRIM47Q96LD4 638 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 RIOX1Q9H6W3 641 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 CAPN11Q9UMQ6 739 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 SUGT1Q9Y2Z0 365 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 LUC7L2Q9Y383 392 aaKnown RBP17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 FLT1P17948 1338 aa17.36■□□□□ 0.37
TNFSF13-202ENST00000349228 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 CCNE1P24864 410 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 ERVK-24P63145 666 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 BRD3Q15059 726 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 TERF2Q15554 542 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 TTI2Q6NXR4 508 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 ZNF662Q6ZS27 426 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 DNAJC7Q99615 494 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 CCNT1O60563 726 aaKnown RBP17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 RHBDL3P58872 404 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 WHAMMP3Q1A5X7 153 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 NAPGQ99747 312 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 ARFGAP3Q9NP61 516 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 USP21Q9UK80 565 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 EPN1Q9Y6I3 576 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 PLIN4Q96Q06 1357 aa17.35■□□□□ 0.37
TNFSF13-202ENST00000349228 LY75O60449 1722 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 PLCG1P19174 1290 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 LETM2Q2VYF4 491 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 CNNM4Q6P4Q7 775 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 P2RX5Q93086 422 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 CRAMP1Q96RY5 1269 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 TRIM9Q9C026 710 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
TNFSF13-202ENST00000349228 CCDC151A5D8V7 595 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 PP2D1A8MPX8 630 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 SRGNP10124 158 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 TXNRD1Q16881 649 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 CC2D1AQ6P1N0 951 aaPredicted RBP17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 RAB34Q9BZG1 259 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 HAUS4Q9H6D7 363 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.37
TNFSF13-202ENST00000349228 NDUFA10O95299 355 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 KRT83P78385 493 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 CSGALNACT2Q8N6G5 542 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 HNRNPLLQ8WVV9 542 aaKnown RBP17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 CEP95Q96GE4 821 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 PARD6BQ9BYG5 372 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.36
TNFSF13-202ENST00000349228 MYO3BQ8WXR4 1341 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 PVALEFA0A1B0GWK0 134 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 TTC26A0AVF1 554 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 COBLO75128 1261 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 PDE4DQ08499 809 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 PDIA5Q14554 519 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 FIGNQ5HY92 759 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 DUSP9Q99956 384 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 IRX2Q9BZI1 471 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 ZNHIT6Q9NWK9 470 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 SPATA31A6Q5VVP1 1343 aa17.32■□□□□ 0.36
TNFSF13-202ENST00000349228 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 FGFR1OPO95684 399 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 SERPINB2P05120 415 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 ARHGAP25P42331 645 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 MEA1Q16626 185 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 ZNF771Q7L3S4 317 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 SLC35F6Q8N357 371 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 EHBP1Q8NDI1 1231 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 TUBGCP2Q9BSJ2 902 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 MTMR7Q9Y216 660 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 BAZ2BQ9UIF8 2168 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 RNF225M0QZC1 329 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 PLA2G4AP47712 749 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 PMS1P54277 932 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms