RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 SLMAPQ14BN4 828 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 CCDC197Q8NCU1 140 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 NOP53Q9NZM5 478 aaKnown RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 PKD2L1Q9P0L9 805 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 MAGEA1P43355 309 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 SESN3P58005 492 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 NCAPH2Q6IBW4 605 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 SYMPKQ92797 1274 aaKnown RBP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 AIFM3Q96NN9 605 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 ARHGEF10LQ9HCE6 1279 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 FRMD4BQ9Y2L6 1034 aa17.04■□□□□ 0.32
SRPK1-201ENST00000346162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRPK1-201ENST00000346162 MCAMP43121 646 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 ZNF131P52739 623 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 DYNLL1P63167 89 aaKnown RBP17.03■□□□□ 0.32
SRPK1-201ENST00000346162 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 DNAI2Q9GZS0 605 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 SEMA3EO15041 775 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 LIFRP42702 1097 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 NNTQ13423 1086 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 HLFQ16534 295 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 OR8K1Q8NGG5 319 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
SRPK1-201ENST00000346162 ATP2B4P23634 1241 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 NBPF9Q3BBW0 867 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 SLC9C1Q4G0N8 1177 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 NOX5Q96PH1 765 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 KCNJ18B7U540 433 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.32
SRPK1-201ENST00000346162 NR5A1Q13285 461 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 KCNJ12Q14500 433 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 RAB3IPQ96QF0 476 aaPredicted RBP17.02■□□□□ 0.32
SRPK1-201ENST00000346162 DNM3Q9UQ16 869 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.32
SRPK1-201ENST00000346162 MORC3Q14149 939 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 NBPF14Q5TI25 921 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 ABTB1Q969K4 478 aaPredicted RBP17.02■□□□□ 0.32
SRPK1-201ENST00000346162 MYO1AQ9UBC5 1043 aa17.02■□□□□ 0.32
SRPK1-201ENST00000346162 CAMSAP1Q5T5Y3 1602 aa17.02■□□□□ 0.31
SRPK1-201ENST00000346162 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.31
SRPK1-201ENST00000346162 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.31
SRPK1-201ENST00000346162 KLHL29Q96CT2 875 aa17.02■□□□□ 0.31
SRPK1-201ENST00000346162 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.31
SRPK1-201ENST00000346162 CREB3O43889 395 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
SRPK1-201ENST00000346162 STRBPQ96SI9 672 aaKnown RBP17.01■□□□□ 0.31
SRPK1-201ENST00000346162 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
SRPK1-201ENST00000346162 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 TMEM110-MUSTN1A8MSY1 372 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 TECP42680 631 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 BTDP43251 543 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 IMPG2Q9BZV3 1241 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 HOMER2Q9NSB8 354 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 TXNDC9O14530 226 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 COG7P83436 770 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 USH1GQ495M9 461 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 SUSD4Q5VX71 490 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 NEK8Q86SG6 692 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 VPS52Q8N1B4 723 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 SP4Q02446 784 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
SRPK1-201ENST00000346162 TAOK1Q7L7X3 1001 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 MPHOSPH6Q99547 160 aaKnown RBP17.01■□□□□ 0.31
SRPK1-201ENST00000346162 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
SRPK1-201ENST00000346162 H7C1D1 291 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 IKBKBO14920 756 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 MMP1P03956 469 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 RASSF2P50749 326 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 TBC1D1Q86TI0 1168 aaPredicted RBP17■□□□□ 0.31
SRPK1-201ENST00000346162 GSDMAQ96QA5 445 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 CIB2O75838 187 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 PHLDB2Q86SQ0 1253 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 PARP9Q8IXQ6 854 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 THOC1Q96FV9 657 aaKnown RBP17■□□□□ 0.31
SRPK1-201ENST00000346162 IKBKGQ9Y6K9 419 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 H0YIN7 160 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 EPHB4P54760 987 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 KCNQ4P56696 695 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 NT5C3AQ9H0P0 336 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 KLHL14Q9P2G3 628 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 SCOCQ9UIL1 159 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
SRPK1-201ENST00000346162 BACH1O14867 736 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
SRPK1-201ENST00000346162 NR1D1P20393 614 aa17■□□□□ 0.31
SRPK1-201ENST00000346162 LONP1P36776 959 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms