RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NDE1Q9NXR1 346 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 STOML1Q9UBI4 398 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 HDAC4P56524 1084 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 HDAC11Q96DB2 347 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 IKBKBO14920 756 aa21.07■□□□□ 0.96
HDAC4-201ENST00000345617 U2AF1L4Q8WU68 220 aaKnown RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 ZC3H18Q86VM9 953 aaKnown RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 PROCA1Q8NCQ7 364 aaPredicted RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 TTC1Q99614 292 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 TMEM60Q9H2L4 133 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 GPC4O75487 556 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 ACTN1P12814 892 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 MRGBPQ9NV56 204 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 SPAG7O75391 227 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 RPSAP08865 295 aaKnown RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 RCN2Q14257 317 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 LRRC8BQ6P9F7 803 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 KRT39Q6A163 491 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 KLC3Q6P597 504 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 PALMDQ9NP74 551 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 PRPF38AQ8NAV1 312 aaKnown RBP21.06■□□□□ 0.96
HDAC4-201ENST00000345617 CATSPER1Q8NEC5 780 aa21.06■□□□□ 0.96
HDAC4-201ENST00000345617 CHMP2AO43633 222 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 MBD4O95243 580 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 TRIM33Q9UPN9 1127 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 GTPBP6O43824 516 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-201ENST00000345617 KRT4P19013 534 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 TTLL3Q9Y4R7 772 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 SERPINB2P05120 415 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 STK17AQ9UEE5 414 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 ART3Q13508 389 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 MYH11P35749 1972 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 ABCC12Q96J65 1359 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 GPAA1O43292 621 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 TNNI1P19237 187 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 BFSP1Q12934 665 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 ZMYM6O95789 1325 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 LONRF3Q496Y0 759 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 APLFQ8IW19 511 aaPredicted RBP21.05■□□□□ 0.96
HDAC4-201ENST00000345617 DESI2Q9BSY9 194 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 TMEM63CQ9P1W3 806 aa21.05■□□□□ 0.96
HDAC4-201ENST00000345617 PPP1R12AO14974 1030 aaPredicted RBP21.04■□□□□ 0.96
HDAC4-201ENST00000345617 SNX1Q13596 522 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 ANAPC5Q9UJX4 755 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 POLE2P56282 527 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 DRP2Q13474 957 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 ATP6V0A1Q93050 837 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 MED23Q9ULK4 1368 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 CHGBP05060 677 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 PFKFB1P16118 471 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 LONP1P36776 959 aaKnown RBP21.04■□□□□ 0.96
HDAC4-201ENST00000345617 GSDMAQ96QA5 445 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
HDAC4-201ENST00000345617 MROH5Q6ZUA9 1318 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 HNRNPCL1O60812 293 aaKnown RBP21.04■□□□□ 0.96
HDAC4-201ENST00000345617 MYSM1Q5VVJ2 828 aa21.04■□□□□ 0.96
HDAC4-201ENST00000345617 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 MCF2LO15068 1137 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 EFCAB14O75071 495 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 GADD45BO75293 160 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-201ENST00000345617 KRT8P05787 483 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 RXRAP19793 462 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 KCTD16Q68DU8 428 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 MSH2P43246 934 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 ARHGDIAP52565 204 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 PICK1Q9NRD5 415 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 ZNF189O75820 626 aaPredicted RBP21.03■□□□□ 0.96
HDAC4-201ENST00000345617 KRT40Q6A162 431 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 A6NJR5 290 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 PPP2R5CQ13362 524 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 GIPC2Q8TF65 315 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 ZBTB9Q96C00 473 aa21.03■□□□□ 0.96
HDAC4-201ENST00000345617 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 VAMP4O75379 141 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 B4E1Z4 1266 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 ABCB4P21439 1286 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 TXKP42681 527 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 BSPRYQ5W0U4 402 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 RNF207Q6ZRF8 634 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 AK8Q96MA6 479 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 CFAP73A6NFT4 308 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 HNRNPCL2B2RXH8 293 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 GSTA4O15217 222 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 CD19P15391 556 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 SLC1A4P43007 532 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 POMGNT1Q8WZA1 660 aa21.02■□□□□ 0.96
HDAC4-201ENST00000345617 ECEL1O95672 775 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms