RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 TTC19Q6DKK2 380 aaPredicted RBP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 ANKRD20A12PQ8NF67 263 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 TTC26A0AVF1 554 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 RIMBP2O15034 1052 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 KLK7P49862 253 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 CDKAL1Q5VV42 579 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 TADA2BQ86TJ2 420 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 EFCAB13Q8IY85 973 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 NLGN1Q8N2Q7 840 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 MMS19Q96T76 1030 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 MTRQ99707 1265 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 EPN1Q9Y6I3 576 aaPredicted RBP17.55■□□□□ 0.4
CLCN2-202ENST00000344937 UTRNP46939 3433 aa17.55■□□□□ 0.4
CLCN2-202ENST00000344937 ARHGAP25P42331 645 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 PRCPP42785 496 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 CYP26C1Q6V0L0 522 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
CLCN2-202ENST00000344937 FAM212AQ96EL1 285 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 TTF2Q9UNY4 1162 aaKnown RBP17.54■□□□□ 0.4
CLCN2-202ENST00000344937 CHD4Q14839 1912 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 USP17L21D6R901 530 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 TSR1Q2NL82 804 aaKnown RBP17.54■□□□□ 0.4
CLCN2-202ENST00000344937 TMTC1Q8IUR5 882 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 STAG1Q8WVM7 1258 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
CLCN2-202ENST00000344937 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
CLCN2-202ENST00000344937 CCDC148Q8NFR7 591 aa17.54■□□□□ 0.4
CLCN2-202ENST00000344937 CYP2D6P10635 497 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 SPATA20Q8TB22 786 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 GSDMAQ96QA5 445 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 NAA15Q9BXJ9 866 aaKnown RBP17.53■□□□□ 0.4
CLCN2-202ENST00000344937 CD209Q9NNX6 404 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 BBOX1O75936 387 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
CLCN2-202ENST00000344937 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
CLCN2-202ENST00000344937 PBX1P40424 430 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 TCP11X2Q5H9J9 407 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 SMCR8Q8TEV9 937 aaPredicted RBP17.53■□□□□ 0.4
CLCN2-202ENST00000344937 KAT2BQ92831 832 aa17.53■□□□□ 0.4
CLCN2-202ENST00000344937 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
CLCN2-202ENST00000344937 RNF40O75150 1001 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 NDUFA10O95299 355 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 STAT6P42226 847 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 KCTD19Q17RG1 926 aaPredicted RBP17.52■□□□□ 0.4
CLCN2-202ENST00000344937 TRIM47Q96LD4 638 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 RNF41Q9H4P4 317 aaPredicted RBP17.52■□□□□ 0.4
CLCN2-202ENST00000344937 MED4Q9NPJ6 270 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 B4DLN1 442 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 AGPAT5Q9NUQ2 364 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 LUC7L2Q9Y383 392 aaKnown RBP17.52■□□□□ 0.4
CLCN2-202ENST00000344937 REXO2Q9Y3B8 237 aaKnown RBP17.52■□□□□ 0.4
CLCN2-202ENST00000344937 MYH8P13535 1937 aa17.52■□□□□ 0.4
CLCN2-202ENST00000344937 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.39
CLCN2-202ENST00000344937 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.39
CLCN2-202ENST00000344937 KIF1CO43896 1103 aaKnown RBP17.52■□□□□ 0.39
CLCN2-202ENST00000344937 TRIM21P19474 475 aaKnown RBP17.52■□□□□ 0.39
CLCN2-202ENST00000344937 IL17AQ16552 155 aa17.52■□□□□ 0.39
CLCN2-202ENST00000344937 SMARCAL1Q9NZC9 954 aa17.52■□□□□ 0.39
CLCN2-202ENST00000344937 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.39
CLCN2-202ENST00000344937 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.39
CLCN2-202ENST00000344937 SRGNP10124 158 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 PHF20Q9BVI0 1012 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 RPN1P04843 607 aaKnown RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 PARP1P09874 1014 aaKnown RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 CXCR5P32302 372 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 SRBD1Q8N5C6 995 aaKnown RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 HPS3Q969F9 1004 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 DCP1AQ9NPI6 582 aaPredicted RBP17.51■□□□□ 0.39
CLCN2-202ENST00000344937 ANKRD31Q8N7Z5 1873 aa17.51■□□□□ 0.39
CLCN2-202ENST00000344937 KLRG2A4D1S0 409 aaPredicted RBP17.5■□□□□ 0.39
CLCN2-202ENST00000344937 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 LACRTQ9GZZ8 138 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 SATB1Q01826 763 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
CLCN2-202ENST00000344937 RAB21Q9UL25 225 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 A0A087WUV0 522 aaPredicted RBP17.5■□□□□ 0.39
CLCN2-202ENST00000344937 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 MYBL2P10244 700 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 MNAT1P51948 309 aa17.5■□□□□ 0.39
CLCN2-202ENST00000344937 ANKRD13CQ8N6S4 541 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms