RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PARVGQ9HBI0 331 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 NUTM2DQ5VT03 806 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ANKRD20A3Q5VUR7 823 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 DHX58Q96C10 678 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PHACTR3Q96KR7 559 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 UNKQ9C0B0 810 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 STMN3Q9NZ72 180 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 S100BP04271 92 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RECQLP46063 649 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CTTNQ14247 550 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PTK2BQ14289 1009 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 VPS53Q5VIR6 699 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 LRRC8AQ8IWT6 810 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CFAP69A5D8W1 941 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 I3L4J1 428 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 SSFA2P28290 1259 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RAPGEF1Q13905 1077 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 FAM96AQ9H5X1 160 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZWILCHQ9H900 591 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 MOV10Q9HCE1 1003 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GAKO14976 1311 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZSCAN9O15535 394 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 HNRNPH1P31943 449 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 UBE3BQ7Z3V4 1068 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 MLPHQ9BV36 600 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZNF215Q9UL58 517 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZBTB39O15060 712 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 FAM107AO95990 144 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 HSPA13P48723 471 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 KANK4Q5T7N3 995 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 TRMT2AQ8IZ69 625 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ATL2Q8NHH9 583 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 TUFT1Q9NNX1 390 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RPSAP08865 295 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 STAT2P52630 851 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PARP9Q8IXQ6 854 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 MINDY2Q8NBR6 621 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 NDEL1Q9GZM8 345 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PRELID1Q9Y255 219 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ARPC4-TTLL3A0A0A6YYG9 625 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 SMIM23A6NLE4 172 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GAS8O95995 478 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 MAPKAPK2P49137 400 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 EVCP57679 992 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 C19orf60Q96EN9 201 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 AKR1B15C9JRZ8 316 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CRTAPO75718 401 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GNPTABQ3T906 1256 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 NUTM2AQ8IVF1 878 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ABTB1Q969K4 478 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PPP1R14DQ9NXH3 145 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 NUTM2FA1L443 756 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GOLGA8RI6L899 631 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 LRPAP1P30533 357 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM68Q6AZZ1 485 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PDE11AQ9HCR9 933 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PIH1D3Q9NQM4 214 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CAPN11Q9UMQ6 739 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 FBXO38Q6PIJ6 1188 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 TLK2Q86UE8 772 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC197Q8NCU1 140 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RNASE11Q8TAA1 199 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 METTL22Q9BUU2 404 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PPCSQ9HAB8 311 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GAP43P17677 238 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 EPS8Q12929 822 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 Q4G0T1 1027 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 THOC7Q6I9Y2 204 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 DDI1Q8WTU0 396 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ARL2BPQ9Y2Y0 163 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZNF839A8K0R7 811 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 IKBKBO14920 756 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ZNF12P17014 697 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 OAS2P29728 719 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 BBS9Q3SYG4 887 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 EPS8L1Q8TE68 723 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GPCPD1Q9NPB8 672 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 FBXO2Q9UK22 296 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 A0A0G2JS52 829 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC169A6NNP5 214 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 FSCBQ5H9T9 825 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 TMIEQ8NEW7 156 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 ATL1Q8WXF7 558 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RILPL2Q969X0 211 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 EPB41L1Q9H4G0 881 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 L1RE1Q9UN81 338 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PARP1P09874 1014 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 KRT3P12035 628 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PRKAR1BP31321 381 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GOLGA8FQ08AF8 430 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 GOLGA8DPQ0D2H9 430 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 DIXDC1Q155Q3 683 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 LUZP2Q86TE4 346 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CCDC12Q8WUD4 166 aaPredicted RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PARD3Q8TEW0 1356 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 PIK3CDO00329 1044 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 EIF4A2Q14240 407 aaKnown RBP4.1□□□□□ -1.75
SYNE2-202ENST00000344113 NFE2L1Q14494 772 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 BCAS4Q8TDM0 211 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 CDRT15Q96T59 188 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms