RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SYNPO2Q9UMS6 1093 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 COG5Q9UP83 839 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 Q9Y3F1 56 aa20.21■□□□□ 0.83
TRA2B-202ENST00000342294 EPOPA6NHQ4 379 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 ASB14A6NK59 587 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 ZBBXA8MT70 800 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 CA3P07451 260 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 PFKMP08237 780 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 TMEM67Q5HYA8 995 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 STRBPQ96SI9 672 aaKnown RBP20.2■□□□□ 0.82
TRA2B-202ENST00000342294 ALDH8A1Q9H2A2 487 aaPredicted RBP20.2■□□□□ 0.82
TRA2B-202ENST00000342294 ACAD9Q9H845 621 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 MKNK2Q9HBH9 465 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 HOMER2Q9NSB8 354 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 HCN4Q9Y3Q4 1203 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 XIRP2A4UGR9 3374 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 TRANK1O15050 2925 aa20.2■□□□□ 0.82
TRA2B-202ENST00000342294 GSG1L2A8MUP6 293 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 GTPBP6O43824 516 aaPredicted RBP20.19■□□□□ 0.82
TRA2B-202ENST00000342294 ZEB2O60315 1214 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 FDX1P10109 184 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 TMEM63BQ5T3F8 832 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 IQSEC1Q6DN90 963 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 TAPT1Q6NXT6 567 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
TRA2B-202ENST00000342294 GMCL1P1Q8NEA9 526 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 PDGFCQ9NRA1 345 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 MTMR4Q9NYA4 1195 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 ZNF536O15090 1300 aa20.19■□□□□ 0.82
TRA2B-202ENST00000342294 TMEM31Q5JXX7 168 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 KRT40Q6A162 431 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 GIMAP6Q6P9H5 292 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 SIRT2Q8IXJ6 389 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 STK11IPQ8N1F8 1099 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 C11orf16Q9NQ32 467 aa20.18■□□□□ 0.82
TRA2B-202ENST00000342294 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
TRA2B-202ENST00000342294 RAB11FIP3O75154 756 aa20.17■□□□□ 0.82
TRA2B-202ENST00000342294 ARHGEF15O94989 841 aa20.17■□□□□ 0.82
TRA2B-202ENST00000342294 ZSCAN25Q6NSZ9 544 aa20.17■□□□□ 0.82
TRA2B-202ENST00000342294 KHSRPQ92945 711 aaKnown RBP eCLIP20.17■□□□□ 0.82
TRA2B-202ENST00000342294 CERS4Q9HA82 394 aa20.17■□□□□ 0.82
TRA2B-202ENST00000342294 RNF146Q9NTX7 359 aa20.17■□□□□ 0.82
TRA2B-202ENST00000342294 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 GPR37L1O60883 481 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 CYP2C9P11712 490 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 BMP3P12645 472 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 TAP1Q03518 808 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 PHOSPHO2Q8TCD6 241 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 MORC4Q8TE76 937 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 TRMT13Q9NUP7 481 aaKnown RBP20.16■□□□□ 0.82
TRA2B-202ENST00000342294 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
TRA2B-202ENST00000342294 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 TTLL1O95922 423 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 SUPT20HL2P0C7V6 817 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 SLFN13Q68D06 897 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 FBXO16Q8IX29 292 aaPredicted RBP20.15■□□□□ 0.82
TRA2B-202ENST00000342294 LRRC47Q8N1G4 583 aaKnown RBP20.15■□□□□ 0.82
TRA2B-202ENST00000342294 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 HLA-CQ95604 372 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 PIEZO1Q92508 2521 aa20.15■□□□□ 0.82
TRA2B-202ENST00000342294 LRRC37A2A6NM11 1700 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 TNKSO95271 1327 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 EEPD1Q7L9B9 569 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.81
TRA2B-202ENST00000342294 TRERF1Q96PN7 1200 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 EPB41L4AQ9HCS5 686 aaPredicted RBP20.14■□□□□ 0.81
TRA2B-202ENST00000342294 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
TRA2B-202ENST00000342294 LPXNO60711 386 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 PRDM1O75626 825 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 ACTN1P12814 892 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 STAT2P52630 851 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 FAM160B2Q86V87 743 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 CHURC1Q8WUH1 139 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 ARNTL2Q8WYA1 636 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
TRA2B-202ENST00000342294 PLIN4Q96Q06 1357 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 PLA2G6O60733 806 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 HMMRO75330 724 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 ALAS1P13196 640 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 RFC2P35250 354 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 PURAQ00577 322 aaKnown RBP20.12■□□□□ 0.81
TRA2B-202ENST00000342294 GRB10Q13322 594 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 DUSP28Q4G0W2 176 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 MUM1L1Q5H9M0 696 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 KIAA1211Q6ZU35 1233 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 HERC6Q8IVU3 1022 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 NEDD1Q8NHV4 660 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 OSBP2Q969R2 916 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 GMCL1Q96IK5 515 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 ZNF287Q9HBT7 754 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 POLR3EQ9NVU0 708 aa20.12■□□□□ 0.81
TRA2B-202ENST00000342294 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
TRA2B-202ENST00000342294 PURBQ96QR8 312 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms