RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 TOP1P11387 765 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 MFAP1P55081 439 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 NKX3-2P78367 333 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 HDAC1Q13547 482 aaPredicted RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 AAMPQ13685 434 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 RRP12Q5JTH9 1297 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 NSMFQ6X4W1 530 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 COL25A1Q9BXS0 654 aaPredicted RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 TBX21Q9UL17 535 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 Q9Y3F1 56 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 SOWAHBA6NEL2 793 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 ICAM1P05362 532 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 EPHB4P54760 987 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 CRBNQ96SW2 442 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 KATNBL1Q9H079 304 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 TCP11L1Q9NUJ3 509 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
NECTIN1-203ENST00000341398 LOC102724159A0A0B4J2E5 919 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 FOXP2O15409 715 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 ADCY6O43306 1168 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 NOVP48745 357 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 SNAP25P60880 206 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 BEX3Q00994 111 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 PWP2Q15269 919 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 MUM1L1Q5H9M0 696 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 BTNL9Q6UXG8 535 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 TLK2Q86UE8 772 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 MAFAQ8NHW3 353 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 TTC14Q96N46 770 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 VTA1Q9NP79 307 aa15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 SPTBN5Q9NRC6 3674 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-203ENST00000341398 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 HSPD1P10809 573 aaKnown RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 FOSL2P15408 326 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 FAM126BQ8IXS8 530 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 MYLIPQ8WY64 445 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 TMEM47Q9BQJ4 181 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 MTIF3Q9H2K0 278 aaKnown RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 TTYH1Q9H313 450 aaPredicted RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 RNF41Q9H4P4 317 aaPredicted RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 GNEQ9Y223 722 aaKnown RBP15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 MYO9BQ13459 2157 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 ZMYM6O95789 1325 aa15.37■□□□□ 0.05
NECTIN1-203ENST00000341398 B4DLN1 442 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 SMPD1P17405 629 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 SLC16A2P36021 539 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 PSRC1Q6PGN9 363 aaPredicted RBP15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 EEPD1Q7L9B9 569 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 FAM227BQ96M60 508 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 PPP1R12CQ9BZL4 782 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 A0A0D9SFI3 127 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CTAGE5O15320 804 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CD4P01730 458 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CSF2RAP15509 400 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 DNAJB2P25686 324 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 NT5C2P49902 561 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 BAATQ14032 418 aaPredicted RBP15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CCDC178Q5BJE1 867 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 TMEM240Q5SV17 173 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 AKNAD1Q5T1N1 836 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 TTBK2Q6IQ55 1244 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 TAPT1Q6NXT6 567 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 SLC43A3Q8NBI5 491 aa15.36■□□□□ 0.05
NECTIN1-203ENST00000341398 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 MORC4Q8TE76 937 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 ESR2Q92731 530 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 TIFAQ96CG3 184 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 HIPK3Q9H422 1215 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 ZNF576Q9H609 170 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 IL23AQ9NPF7 189 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 GPHNQ9NQX3 736 aaPredicted RBP15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 POLR3EQ9NVU0 708 aa15.35■□□□□ 0.05
NECTIN1-203ENST00000341398 ASTN1O14525 1302 aa15.34■□□□□ 0.05
NECTIN1-203ENST00000341398 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms