RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 LEKR1Q6ZMV7 388 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
PERM1-201ENST00000341290 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 YY1AP1Q9H869 796 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 CALM1P0DP23 149 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 CALM2P0DP24 149 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 CALM3P0DP25 149 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 MECOMQ03112 1051 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 SPAG1Q07617 926 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 GOLGA5Q8TBA6 731 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 USP17L8P0C7I0 530 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 SMCR8Q8TEV9 937 aaPredicted RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 DYNLL2Q96FJ2 89 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 FAM204AQ9H8W3 233 aa17.09■□□□□ 0.33
PERM1-201ENST00000341290 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
PERM1-201ENST00000341290 DDAH1O94760 285 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 FECHP22830 423 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 BLIDQ8IZY5 108 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 ADSSL1Q8N142 457 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.33
PERM1-201ENST00000341290 PSMB7Q99436 277 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 DISC1Q9NRI5 854 aa17.08■□□□□ 0.33
PERM1-201ENST00000341290 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 SRLQ86TD4 932 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 BRIP1Q9BX63 1249 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 MCM9Q9NXL9 1143 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 CWC15Q9P013 229 aaKnown RBP17.08■□□□□ 0.32
PERM1-201ENST00000341290 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 TNRC6CQ9HCJ0 1690 aaKnown RBP17.08■□□□□ 0.32
PERM1-201ENST00000341290 TAF1P21675 1872 aa17.08■□□□□ 0.32
PERM1-201ENST00000341290 UBA7P41226 1012 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 DTHD1Q6ZMT9 781 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 ILDR2Q71H61 639 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 C4orf32Q8N8J7 132 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 SAR1BQ9Y6B6 198 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 H7C1D1 291 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 TRAPPC11Q7Z392 1133 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
PERM1-201ENST00000341290 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 USP17L3A6NCW0 530 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 USP17L4A6NCW7 530 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 LGALS16A8MUM7 142 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 PLEKP08567 350 aaPredicted RBP17.07■□□□□ 0.32
PERM1-201ENST00000341290 MYBL2P10244 700 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 TFAP4Q01664 338 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 USP17L1Q7RTZ2 530 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 NSUN4Q96CB9 384 aaKnown RBP17.07■□□□□ 0.32
PERM1-201ENST00000341290 RABEP2Q9H5N1 569 aa17.07■□□□□ 0.32
PERM1-201ENST00000341290 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
PERM1-201ENST00000341290 TRIM14Q14142 442 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
PERM1-201ENST00000341290 RNF40O75150 1001 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 TM4SF1P30408 202 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 C2orf54Q08AI8 447 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
PERM1-201ENST00000341290 ZNF804BA4D1E1 1349 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
PERM1-201ENST00000341290 FCER1AP12319 257 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
PERM1-201ENST00000341290 TBC1D8BQ0IIM8 1120 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 MYO1AQ9UBC5 1043 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
PERM1-201ENST00000341290 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 MYH13Q9UKX3 1938 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 USP14P54578 494 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 TUBB2AQ13885 445 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 DEFB132Q7Z7B7 95 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 TUBB2BQ9BVA1 445 aa17.05■□□□□ 0.32
PERM1-201ENST00000341290 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms