RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 HHIPL1Q96JK4 782 aa23.66■■□□□ 1.38
CLDND1-201ENST00000341181 TXNRD2Q9NNW7 524 aa23.66■■□□□ 1.38
CLDND1-201ENST00000341181 CREBZFQ9NS37 354 aa23.66■■□□□ 1.38
CLDND1-201ENST00000341181 M0R2N6 131 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 PDIA4P13667 645 aaKnown RBP23.65■■□□□ 1.38
CLDND1-201ENST00000341181 SAFBQ15424 915 aaKnown RBP eCLIP23.65■■□□□ 1.38
CLDND1-201ENST00000341181 UBE2SQ16763 222 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 LBX2Q6XYB7 198 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 BLIDQ8IZY5 108 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 RGS22Q8NE09 1264 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 ESYT2A0FGR8 921 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 CENPFP49454 3210 aa23.65■■□□□ 1.38
CLDND1-201ENST00000341181 CALML3P27482 149 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 ADCY7P51828 1080 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 GNL2Q13823 731 aaKnown RBP23.64■■□□□ 1.38
CLDND1-201ENST00000341181 SNRNP48Q6IEG0 339 aaKnown RBP23.64■■□□□ 1.38
CLDND1-201ENST00000341181 USP17L6PQ6QN14 398 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 ANKRD23Q86SG2 305 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 NOSTRINQ8IVI9 506 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 DAGLBQ8NCG7 672 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 PAGR1Q9BTK6 254 aa23.64■■□□□ 1.38
CLDND1-201ENST00000341181 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.38
CLDND1-201ENST00000341181 TESPA1A2RU30 521 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-201ENST00000341181 NFIBO00712 420 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 CNMDO75829 334 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 ALAS1P13196 640 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 PABPC4Q13310 644 aaKnown RBP eCLIP23.64■■□□□ 1.374e-9■□□□□ 10.6
CLDND1-201ENST00000341181 PLS1Q14651 629 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 CCDC102AQ96A19 550 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 FTOQ9C0B1 505 aaKnown RBP eCLIP23.64■■□□□ 1.37
CLDND1-201ENST00000341181 FOXP1Q9H334 677 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-201ENST00000341181 PSTPIP2Q9H939 334 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 C6orf50Q9HD87 102 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 RIC8AQ9NPQ8 531 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 TMEM260Q9NX78 707 aa23.64■■□□□ 1.37
CLDND1-201ENST00000341181 TRAK2O60296 914 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 DEKP35659 375 aaKnown RBP23.63■■□□□ 1.37
CLDND1-201ENST00000341181 MUM1L1Q5H9M0 696 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 CLEC17AQ6ZS10 378 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 TBC1D5Q92609 795 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 PGBD1Q96JS3 809 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 BIN2Q9UBW5 565 aaPredicted RBP23.63■■□□□ 1.37
CLDND1-201ENST00000341181 PCDHA6Q9UN73 950 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 PCDHA8Q9Y5H6 950 aa23.63■■□□□ 1.37
CLDND1-201ENST00000341181 MANSC4A6NHS7 340 aaPredicted RBP23.62■■□□□ 1.37
CLDND1-201ENST00000341181 RASSF10A6NK89 507 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 FDX1P10109 184 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 OSBPP22059 807 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 DNM1Q05193 864 aaKnown RBP23.62■■□□□ 1.37
CLDND1-201ENST00000341181 GZF1Q9H116 711 aaPredicted RBP23.62■■□□□ 1.37
CLDND1-201ENST00000341181 R3HDMLQ9H3Y0 253 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 ZSCAN16Q9H4T2 348 aaPredicted RBP23.62■■□□□ 1.37
CLDND1-201ENST00000341181 BRMS1Q9HCU9 246 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 MEIS2O14770 477 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 GNA11P29992 359 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 REXO1Q8N1G1 1221 aaKnown RBP23.62■■□□□ 1.37
CLDND1-201ENST00000341181 CLEC4DQ8WXI8 215 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 CUL5Q93034 780 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 TEX13BQ9BXU2 312 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 RBPJLQ9UBG7 517 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 MYH15Q9Y2K3 1946 aa23.62■■□□□ 1.37
CLDND1-201ENST00000341181 DDX11L8A8MPP1 907 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 HOXA13P31271 388 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-201ENST00000341181 JAKMIP3Q5VZ66 844 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 FAM177A1Q8N128 213 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-201ENST00000341181 SMCR8Q8TEV9 937 aaPredicted RBP23.61■■□□□ 1.37
CLDND1-201ENST00000341181 PNMA3Q9UL41 463 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 SLC45A1Q9Y2W3 748 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 ABCB11O95342 1321 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 AOC2O75106 756 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 OAZ1P54368 228 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 GALNT17Q6IS24 598 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
CLDND1-201ENST00000341181 WNT7AO00755 349 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 STAT3P40763 770 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 CLK2P49760 499 aaKnown RBP23.6■■□□□ 1.37
CLDND1-201ENST00000341181 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 MYSM1Q5VVJ2 828 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 BRAPQ7Z569 592 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 MB21D1Q8N884 522 aa23.6■■□□□ 1.37
CLDND1-201ENST00000341181 CAPNS2Q96L46 248 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 TRERF1Q96PN7 1200 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 SPATC1LQ9H0A9 340 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 RNF146Q9NTX7 359 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 MRPL11Q9Y3B7 192 aaKnown RBP23.59■■□□□ 1.37
CLDND1-201ENST00000341181 TCHHQ07283 1943 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 CFBP00751 764 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 GSE1Q14687 1217 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 Q3C1V9 767 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 IFNL1Q8IU54 200 aa23.59■■□□□ 1.37
CLDND1-201ENST00000341181 TOB1P50616 345 aaPredicted RBP23.58■■□□□ 1.37
CLDND1-201ENST00000341181 GDPD2Q9HCC8 539 aa23.58■■□□□ 1.37
CLDND1-201ENST00000341181 MRPL12P52815 198 aaKnown RBP23.58■■□□□ 1.36
CLDND1-201ENST00000341181 BICD2Q8TD16 824 aa23.58■■□□□ 1.36
CLDND1-201ENST00000341181 TFIP11Q9UBB9 837 aaKnown RBP23.58■■□□□ 1.36
CLDND1-201ENST00000341181 CNPY2Q9Y2B0 182 aa23.58■■□□□ 1.36
CLDND1-201ENST00000341181 RBBP6Q7Z6E9 1792 aaKnown RBP23.58■■□□□ 1.36
CLDND1-201ENST00000341181 ANKRD13CQ8N6S4 541 aa23.57■■□□□ 1.36
CLDND1-201ENST00000341181 PARK7Q99497 189 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms