RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SASH3O75995 380 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 TTLL1O95922 423 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 PDHBP11177 359 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 TRIM29Q14134 588 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 RBM28Q9NW13 759 aaKnown RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 CLIC4Q9Y696 253 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 MAGEA9P43362 315 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 ME1P48163 572 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 SATB1Q01826 763 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 PRKG1Q13976 671 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 GLIS2Q9BZE0 524 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 A0A1W2PRG0 241 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 SNAP25P60880 206 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 EARS2Q5JPH6 523 aaKnown RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 UBXN4Q92575 508 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 RNF26Q9BY78 433 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 ANO10Q9NW15 660 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 ARGLU1Q9NWB6 273 aaPredicted RBP17.04■□□□□ 0.32
BRAT1-201ENST00000340611 GPRC5DQ9NZD1 345 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 ADAM21Q9UKJ8 722 aa17.04■□□□□ 0.32
BRAT1-201ENST00000340611 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 SMC2O95347 1197 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 ICA1Q05084 483 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 E4F1Q66K89 784 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 CEP57L1Q8IYX8 460 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 RNF217Q8TC41 542 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 H7C1D1 291 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 RPS12P25398 132 aaKnown RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 KIF5BP33176 963 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 MAP2K2P36507 400 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 DGKZQ13574 1117 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 LEKR1Q6ZMV7 388 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 DPF2Q92785 391 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 STK36Q9NRP7 1315 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 MYH15Q9Y2K3 1946 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 TAL1P17542 331 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-201ENST00000340611 RCAN1P53805 252 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 RASGRP4Q8TDF6 673 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 GGA3Q9NZ52 723 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 PGAP2Q9UHJ9 254 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 RCOR1Q9UKL0 485 aa17.03■□□□□ 0.32
BRAT1-201ENST00000340611 CTAGE5O15320 804 aa17.02■□□□□ 0.32
BRAT1-201ENST00000340611 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
BRAT1-201ENST00000340611 ZRANB2O95218 330 aaKnown RBP eCLIP17.02■□□□□ 0.321e-5■■■■□ 25.7
BRAT1-201ENST00000340611 MMP1P03956 469 aa17.02■□□□□ 0.32
BRAT1-201ENST00000340611 TMC6Q7Z403 805 aa17.02■□□□□ 0.32
BRAT1-201ENST00000340611 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.32
BRAT1-201ENST00000340611 PIGSQ96S52 555 aa17.02■□□□□ 0.32
BRAT1-201ENST00000340611 IRF6O14896 467 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 ACTN2P35609 894 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 PPP2R5AQ15172 486 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 HEATR3Q7Z4Q2 680 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 GPC2Q8N158 579 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 PPP1R13BQ96KQ4 1090 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 SDF4Q9BRK5 362 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.31
BRAT1-201ENST00000340611 BIN1O00499 593 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 SCG2P13521 617 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 NOVP48745 357 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 XPO4Q9C0E2 1151 aaKnown RBP17.01■□□□□ 0.31
BRAT1-201ENST00000340611 IFNKQ9P0W0 207 aa17.01■□□□□ 0.31
BRAT1-201ENST00000340611 GREB1LQ9C091 1923 aaPredicted RBP17.01■□□□□ 0.31
BRAT1-201ENST00000340611 WNT7AO00755 349 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 DPCR1Q3MIW9 517 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 ARMCX5Q6P1M9 558 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
BRAT1-201ENST00000340611 ENGASEQ8NFI3 743 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 MARCKSP29966 332 aaPredicted RBP17■□□□□ 0.31
BRAT1-201ENST00000340611 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 NPY5RQ15761 445 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 MCTP2Q6DN12 878 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 TMEM179Q6ZVK1 233 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 FAM83AQ86UY5 434 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 WASF1Q92558 559 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 KANSL2Q9H9L4 492 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 CABP5Q9NP86 173 aa17■□□□□ 0.31
BRAT1-201ENST00000340611 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
BRAT1-201ENST00000340611 INPP5BP32019 993 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms