RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TAL1P17542 331 aaPredicted RBP8.97□□□□□ -0.97
TMC1-202ENST00000340019 PIK3AP1Q6ZUJ8 805 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 REXO1Q8N1G1 1221 aaKnown RBP8.97□□□□□ -0.97
TMC1-202ENST00000340019 ATG4CQ96DT6 458 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 PSTPIP2Q9H939 334 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 CLIC4Q9Y696 253 aa8.97□□□□□ -0.97
TMC1-202ENST00000340019 RBBP6Q7Z6E9 1792 aaKnown RBP8.96□□□□□ -0.97
TMC1-202ENST00000340019 MEIS2O14770 477 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 MRPL12P52815 198 aaKnown RBP8.96□□□□□ -0.97
TMC1-202ENST00000340019 SNAPC2Q13487 334 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 ANO1Q5XXA6 986 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.97
TMC1-202ENST00000340019 TEX2Q8IWB9 1127 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 LINC00301Q8NCQ3 95 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 GLT8D2Q9H1C3 349 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 HOXC10Q9NYD6 342 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 AGTPBP1Q9UPW5 1226 aa8.96□□□□□ -0.97
TMC1-202ENST00000340019 SPDYE16A6NNV3 312 aaPredicted RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 ATP2A1O14983 1001 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 TRAPPC10P48553 1259 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 CEBPZQ03701 1054 aaKnown RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 PTPAQ15257 358 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 POTEEQ6S8J3 1075 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 GADL1Q6ZQY3 521 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 SPATA32Q96LK8 384 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 AGBL1Q96MI9 1066 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 BIN2Q9UBW5 565 aaPredicted RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 MYH7BA7E2Y1 1941 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 ABCB11O95342 1321 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 PIK3CDO00329 1044 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 WNT7AO00755 349 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 ZBED4O75132 1171 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 YEATS4O95619 227 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 ZBTB48P10074 688 aaPredicted RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 PTMSP20962 102 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 OAZ1P54368 228 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 NBR1Q14596 966 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 SF3A1Q15459 793 aaKnown RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 KRT25Q7Z3Z0 450 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 SAPCD2Q86UD0 394 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 SMC1BQ8NDV3 1235 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 ZNF214Q9UL59 606 aaPredicted RBP8.96□□□□□ -0.98
TMC1-202ENST00000340019 PCDHB6Q9Y5E3 794 aa8.96□□□□□ -0.98
TMC1-202ENST00000340019 CCDC194A0A1B0GVG4 234 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 GADD45BO75293 160 aaPredicted RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 GHRHRQ02643 423 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 SLC39A14Q15043 492 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 UBE2SQ16763 222 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 SPRYD7Q5W111 196 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 ANP32EQ9BTT0 268 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 RAVER2Q9HCJ3 691 aaKnown RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 PNMA2Q9UL42 364 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 CCPG1Q9ULG6 757 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 MORC2Q9Y6X9 1032 aaPredicted RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 EDIL3O43854 480 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 HUNKP57058 714 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 TMEM132BQ14DG7 1078 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 JAKMIP3Q5VZ66 844 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 USP17L6PQ6QN14 398 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 CLEC4DQ8WXI8 215 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 PGBD1Q96JS3 809 aa8.95□□□□□ -0.98
TMC1-202ENST00000340019 P2RX7Q99572 595 aaKnown RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 NOL7Q9UMY1 257 aaKnown RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 MRPL11Q9Y3B7 192 aaKnown RBP8.95□□□□□ -0.98
TMC1-202ENST00000340019 TOMM70O94826 608 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 GTF2A2P52657 109 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 NONOQ15233 471 aaKnown RBP eCLIP8.94□□□□□ -0.98
TMC1-202ENST00000340019 INF2Q27J81 1249 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 CPXCR1Q8N123 301 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 ASCC2Q9H1I8 757 aaPredicted RBP8.94□□□□□ -0.98
TMC1-202ENST00000340019 PPP6R2O75170 966 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 CETPP11597 493 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 UBE2HP62256 183 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 AP3B2Q13367 1082 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 TTC38Q5R3I4 469 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 TBCKQ8TEA7 893 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 CRYGNQ8WXF5 182 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 SLC45A1Q9Y2W3 748 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 RIPK3Q9Y572 518 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 SPTLC2O15270 562 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 STK38Q15208 465 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 MCTP2Q6DN12 878 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 RASAL3Q86YV0 1011 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 MB21D1Q8N884 522 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 GPT2Q8TD30 523 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 TBC1D5Q92609 795 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 TLL2Q9Y6L7 1015 aa8.94□□□□□ -0.98
TMC1-202ENST00000340019 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
TMC1-202ENST00000340019 NFIBO00712 420 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 HSD17B4P51659 736 aa8.93□□□□□ -0.98
TMC1-202ENST00000340019 HERVK_113P62684 666 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms