RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 ARHGEF25Q86VW2 580 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 GABPB2Q8TAK5 448 aaPredicted RBP13.7□□□□□ -0.22
OTOF-203ENST00000339598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
OTOF-203ENST00000339598 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 KLHL14Q9P2G3 628 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 IFNAR1P17181 557 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
OTOF-203ENST00000339598 PDE6BP35913 854 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 SIK1P57059 783 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 PTPN12Q05209 780 aaKnown RBP13.7□□□□□ -0.22
OTOF-203ENST00000339598 KCTD16Q68DU8 428 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 CAPN12Q6ZSI9 719 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 PALM2Q8IXS6 379 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 FAM71BQ8TC56 605 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 TACO1Q9BSH4 297 aaKnown RBP13.7□□□□□ -0.22
OTOF-203ENST00000339598 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 STK38LQ9Y2H1 464 aa13.7□□□□□ -0.22
OTOF-203ENST00000339598 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 CDC25BP30305 580 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 LIG3P49916 1009 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 ARMCX5Q6P1M9 558 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 CCDC125Q86Z20 511 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 PLCD3Q8N3E9 789 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 PRKAB2O43741 272 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 SASH1O94885 1247 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 FMNL1O95466 1100 aaPredicted RBP13.69□□□□□ -0.22
OTOF-203ENST00000339598 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
OTOF-203ENST00000339598 PABPC4Q13310 644 aaKnown RBP eCLIP13.69□□□□□ -0.22
OTOF-203ENST00000339598 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 RSAD2Q8WXG1 361 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
OTOF-203ENST00000339598 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 AIFM3Q96NN9 605 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
OTOF-203ENST00000339598 M0R2C6 588 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 ZMYND10O75800 440 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 ADD2P35612 726 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 LIG4P49917 911 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 RBL2Q08999 1139 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
OTOF-203ENST00000339598 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
OTOF-203ENST00000339598 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 TROVE2P10155 538 aaKnown RBP eCLIP13.68□□□□□ -0.22
OTOF-203ENST00000339598 RASSF2P50749 326 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 ATP2A3Q93084 1043 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 SAMSN1Q9NSI8 373 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 ZSWIM5Q9P217 1185 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 PLXNC1O60486 1568 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 SEC31AO94979 1220 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 NR2F2P24468 414 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 DHTKD1Q96HY7 919 aaPredicted RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 KRT12Q99456 494 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 CUEDC2Q9H467 287 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 TXNDC9O14530 226 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 N4BP1O75113 896 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 KSR1Q8IVT5 923 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 MAGEF1Q9HAY2 307 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 SH3BP5O60239 455 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 FOSP01100 380 aaPredicted RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 DYNLL1P63167 89 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 LRRC41Q15345 812 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 NIM1KQ8IY84 436 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 RPUSD2Q8IZ73 545 aaKnown RBP13.68□□□□□ -0.22
OTOF-203ENST00000339598 P2RX5Q93086 422 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 RAB20Q9NX57 234 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 TACC3Q9Y6A5 838 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 ERVK-7P63135 1459 aa13.68□□□□□ -0.22
OTOF-203ENST00000339598 THAP12O43422 761 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 SCYL2Q6P3W7 929 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 RESTQ13127 1097 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 MAN1B1Q9UKM7 699 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 ZNF148Q9UQR1 794 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 RABGAP1Q9Y3P9 1069 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 MMP1P03956 469 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
OTOF-203ENST00000339598 CCT5P48643 541 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 YARSP54577 528 aaKnown RBP13.67□□□□□ -0.22
OTOF-203ENST00000339598 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
OTOF-203ENST00000339598 POLA2Q14181 598 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 MAGOHBQ96A72 148 aaKnown RBP13.67□□□□□ -0.22
OTOF-203ENST00000339598 SUGCTQ9HAC7 445 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 PDE6CP51160 858 aa13.67□□□□□ -0.22
OTOF-203ENST00000339598 RNF10Q8N5U6 811 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms