RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MDH1P40925 334 aaKnown RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPGR-202ENST00000339363 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 THEMISQ8N1K5 641 aaPredicted RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 MLKLQ8NB16 471 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 LGR5O75473 907 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 ATP6V1G2O95670 118 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 MYZAPP0CAP1 466 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 RAB27AP51159 221 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 PPARAQ07869 468 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 TTC39AQ5SRH9 613 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 RAPGEF4Q8WZA2 1011 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 LRRC1Q9BTT6 524 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 LY9Q9HBG7 655 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 ZSWIM5Q9P217 1185 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 C15orf41Q9Y2V0 281 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 PRDM1O75626 825 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 TPP2P29144 1249 aaPredicted RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 INHBEP58166 350 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 CUL3Q13618 768 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 RASGRP2Q7LDG7 609 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 MYLK4Q86YV6 388 aaPredicted RBP10.28□□□□□ -0.76
RPGR-202ENST00000339363 SELENOSQ9BQE4 189 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 SLC26A6Q9BXS9 759 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 HAUS4Q9H6D7 363 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
RPGR-202ENST00000339363 ESYT3A0FGR9 886 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 TARSL2A2RTX5 802 aaKnown RBP10.27□□□□□ -0.76
RPGR-202ENST00000339363 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.76
RPGR-202ENST00000339363 ZNF213O14771 459 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 ZPR1O75312 459 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 CDKL5O76039 1030 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 VIMP08670 466 aaKnown RBP10.27□□□□□ -0.76
RPGR-202ENST00000339363 METAP2P50579 478 aaKnown RBP eCLIP10.27□□□□□ -0.76
RPGR-202ENST00000339363 KRT83P78385 493 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 ATP11AP98196 1134 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 UBXN1Q04323 297 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 POSTNQ15063 836 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.76
RPGR-202ENST00000339363 EZH2Q15910 746 aaKnown RBP10.27□□□□□ -0.76
RPGR-202ENST00000339363 HLFQ16534 295 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 ARMCX6Q7L4S7 300 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 BRAPQ7Z569 592 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 SYCP3Q8IZU3 236 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 TTC5Q8N0Z6 440 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 TAB2Q9NYJ8 693 aa10.27□□□□□ -0.76
RPGR-202ENST00000339363 USO1O60763 962 aaKnown RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 CYLC1P35663 651 aaPredicted RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 PHKA1P46020 1223 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 TTMPQ5BVD1 217 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 IFT20Q8IY31 132 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 SAMD15Q9P1V8 674 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 FBXO2Q9UK22 296 aaPredicted RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 LUC7L2Q9Y383 392 aaKnown RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 TACC1O75410 805 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 IDH1O75874 414 aaKnown RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 GUCY2DQ02846 1103 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 PAK2Q13177 524 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 SLMAPQ14BN4 828 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 ARHGAP22Q7Z5H3 698 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 YTHDF3Q7Z739 585 aaKnown RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 TEKT4Q8WW24 435 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 GREM2Q9H772 168 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.27□□□□□ -0.77
RPGR-202ENST00000339363 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.77
RPGR-202ENST00000339363 MAPK8IP1Q9UQF2 711 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 PKD1L3Q7Z443 1732 aa10.27□□□□□ -0.77
RPGR-202ENST00000339363 CPDO75976 1380 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 IL15P40933 162 aaPredicted RBP10.26□□□□□ -0.77
RPGR-202ENST00000339363 ANKRD20A8PQ5CZ79 823 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 SPATA31A3Q5VYP0 1347 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 EMBQ6PCB8 327 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 UBLCP1Q8WVY7 318 aaPredicted RBP10.26□□□□□ -0.77
RPGR-202ENST00000339363 SEC16BQ96JE7 1060 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 CSRNP2Q9H175 543 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 CWC25Q9NXE8 425 aaPredicted RBP10.26□□□□□ -0.77
RPGR-202ENST00000339363 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 RASSF10A6NK89 507 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 SMIM23A6NLE4 172 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
RPGR-202ENST00000339363 CREB3O43889 395 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 FERP16591 822 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 TMOD1P28289 359 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 ERVK-24P63145 666 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 NR1I3Q14994 352 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 SH3GL2Q99962 352 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 UBAC1Q9BSL1 405 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 RMI1Q9H9A7 625 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 ANGEL1Q9UNK9 670 aaKnown RBP10.26□□□□□ -0.77
RPGR-202ENST00000339363 AKAP11Q9UKA4 1901 aa10.26□□□□□ -0.77
RPGR-202ENST00000339363 RIC1Q4ADV7 1423 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms