RNA–Protein interactions for RNA: ENST00000337908.4

MS4A4A-201, Transcript of membrane spanning 4-domains A4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A4A, Length 1,604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-201ENST00000337908 PHF20L1A8MW92 1017 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 WDR46O15213 610 aaKnown RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 MARCH6O60337 910 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 PLA2G6O60733 806 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 PRPHP41219 470 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 EPS15P42566 896 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 USP14P54578 494 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 TMEM266Q2M3C6 531 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 USH1GQ495M9 461 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 ELOA2Q8IYF1 753 aaPredicted RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
MS4A4A-201ENST00000337908 GOLGA6L19H0YKK7 550 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 WNT7AO00755 349 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 DSG3P32926 999 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 GRIN1Q05586 938 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 GPR162Q16538 588 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 UBE2SQ16763 222 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 SCYL3Q8IZE3 742 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 PDILTQ8N807 584 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 DHX58Q96C10 678 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 WRNIP1Q96S55 665 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 RAB34Q9BZG1 259 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
MS4A4A-201ENST00000337908 SPDYE3A6NKU9 549 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 BECN2A8MW95 431 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 SMC2O95347 1197 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 GCFC2P16383 781 aaKnown RBP12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 ZNF165P49910 485 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 TPM4P67936 248 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 SULF1Q8IWU6 871 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 IQUBQ8NA54 791 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 DNAJC25Q9H1X3 360 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 EHMT1Q9H9B1 1298 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.43
MS4A4A-201ENST00000337908 UBA7P41226 1012 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 NLRP12P59046 1061 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 SNAP25P60880 206 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 POSTNQ15063 836 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 CALCRLQ16602 461 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 LONRF3Q496Y0 759 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 EPSTI1Q96J88 318 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 AK8Q96MA6 479 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 PNMA2Q9UL42 364 aa12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 MRPL11Q9Y3B7 192 aaKnown RBP12.33□□□□□ -0.44
MS4A4A-201ENST00000337908 ABCB11O95342 1321 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 INPP5BP32019 993 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 NF2P35240 595 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 ANO3Q9BYT9 981 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 CBX8Q9HC52 389 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 DACH1Q9UI36 760 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
MS4A4A-201ENST00000337908 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 STAT6P42226 847 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 PNOCQ13519 176 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 MTMR2Q13614 643 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 WDR18Q9BV38 432 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 GLIS2Q9BZE0 524 aaPredicted RBP12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 ZC3H4Q9UPT8 1303 aaKnown RBP12.31□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 BIN1O00499 593 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 ACTN4O43707 911 aaKnown RBP12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 USP11P51784 963 aa12.3□□□□□ -0.44
MS4A4A-201ENST00000337908 HIRAP54198 1017 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms