RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 AK8Q96MA6 479 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
RTN4-202ENST00000337526 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 BTDP43251 543 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 CCT5P48643 541 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 ITIH3Q06033 890 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 TOB2Q14106 344 aaPredicted RBP15.1■□□□□ 0.01
RTN4-202ENST00000337526 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
RTN4-202ENST00000337526 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 UHMK1Q8TAS1 419 aaKnown RBP15.1■□□□□ 0.01
RTN4-202ENST00000337526 PDLIM2Q96JY6 352 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 PCDHA4Q9UN74 947 aa15.1■□□□□ 0.01
RTN4-202ENST00000337526 IL6STP40189 918 aaPredicted RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 APBA1Q02410 837 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 NAA35Q5VZE5 725 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 MIER3Q7Z3K6 550 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 ZDHHC9Q9Y397 364 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 GBP1P32455 592 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 FKBP3Q00688 224 aaKnown RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 FBXO38Q6PIJ6 1188 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 SARM1Q6SZW1 724 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 SDCCAG8Q86SQ7 713 aaPredicted RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 ZBED4O75132 1171 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 NLRX1Q86UT6 975 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 LCORLQ8N3X6 602 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 EPSTI1Q96J88 318 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 KRT12Q99456 494 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 NOP56O00567 594 aaKnown RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 SPATS2Q86XZ4 545 aaKnown RBP15.09■□□□□ 0.01
RTN4-202ENST00000337526 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 SAMD9LQ8IVG5 1584 aa15.09■□□□□ 0.01
RTN4-202ENST00000337526 SOS2Q07890 1332 aaPredicted RBP15.08■□□□□ 0.01
RTN4-202ENST00000337526 LOC102724428A0A0B4J2F2 783 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 SIK1P57059 783 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 TSNAXIP1Q2TAA8 658 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 CLEC17AQ6ZS10 378 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 FBXO11Q86XK2 927 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 PPM1KQ8N3J5 372 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0.01
RTN4-202ENST00000337526 VGLL3A8MV65 326 aa15.08■□□□□ 0
RTN4-202ENST00000337526 ARHGAP24Q8N264 748 aa15.08■□□□□ 0
RTN4-202ENST00000337526 CCDC89Q8N998 374 aa15.08■□□□□ 0
RTN4-202ENST00000337526 VTI1AQ96AJ9 217 aa15.08■□□□□ 0
RTN4-202ENST00000337526 KLHL14Q9P2G3 628 aa15.08■□□□□ 0
RTN4-202ENST00000337526 KCNG1Q9UIX4 513 aa15.08■□□□□ 0
RTN4-202ENST00000337526 ERBB3P21860 1342 aa15.08■□□□□ 0
RTN4-202ENST00000337526 ADCY8P40145 1251 aa15.08■□□□□ 0
RTN4-202ENST00000337526 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
RTN4-202ENST00000337526 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
RTN4-202ENST00000337526 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0
RTN4-202ENST00000337526 H0YIN7 160 aa15.08■□□□□ 0
RTN4-202ENST00000337526 KRT19P08727 400 aa15.08■□□□□ 0
RTN4-202ENST00000337526 NR2F2P24468 414 aa15.08■□□□□ 0
RTN4-202ENST00000337526 MAN2A1Q16706 1144 aa15.08■□□□□ 0
RTN4-202ENST00000337526 TTC19Q6DKK2 380 aaPredicted RBP15.08■□□□□ 0
RTN4-202ENST00000337526 DLGAP5Q15398 846 aa15.07■□□□□ 0
RTN4-202ENST00000337526 NLRP10Q86W26 655 aa15.07■□□□□ 0
RTN4-202ENST00000337526 ATP2B4P23634 1241 aa15.07■□□□□ 0
RTN4-202ENST00000337526 RASSF2P50749 326 aa15.07■□□□□ 0
RTN4-202ENST00000337526 ZBED6P86452 979 aa15.07■□□□□ 0
RTN4-202ENST00000337526 LRRC41Q15345 812 aa15.07■□□□□ 0
RTN4-202ENST00000337526 CERKLQ49MI3 558 aaPredicted RBP15.07■□□□□ 0
RTN4-202ENST00000337526 RWDD2AQ9UIY3 292 aa15.07■□□□□ 0
RTN4-202ENST00000337526 STK38LQ9Y2H1 464 aa15.07■□□□□ 0
RTN4-202ENST00000337526 DAPK3O43293 454 aa15.07■□□□□ 0
RTN4-202ENST00000337526 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
RTN4-202ENST00000337526 NDUFA10O95299 355 aa15.07■□□□□ 0
RTN4-202ENST00000337526 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
RTN4-202ENST00000337526 SLFN13Q68D06 897 aa15.07■□□□□ 0
RTN4-202ENST00000337526 CTAGE3PQ8IX95 158 aa15.07■□□□□ 0
RTN4-202ENST00000337526 P3H4Q92791 437 aa15.07■□□□□ 0
RTN4-202ENST00000337526 AZI2Q9H6S1 392 aa15.07■□□□□ 0
RTN4-202ENST00000337526 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
RTN4-202ENST00000337526 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
RTN4-202ENST00000337526 I3L4J1 428 aa15.07■□□□□ 0
RTN4-202ENST00000337526 SEMA3EO15041 775 aa15.07■□□□□ 0
RTN4-202ENST00000337526 HEXIM1O94992 359 aaKnown RBP15.07■□□□□ 0
RTN4-202ENST00000337526 MYL1P05976 194 aa15.07■□□□□ 0
RTN4-202ENST00000337526 IGKV5-2P06315 115 aa15.07■□□□□ 0
RTN4-202ENST00000337526 SCNN1DP51172 638 aa15.07■□□□□ 0
RTN4-202ENST00000337526 EPHB4P54760 987 aa15.07■□□□□ 0
RTN4-202ENST00000337526 SNX16P57768 344 aa15.07■□□□□ 0
RTN4-202ENST00000337526 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 02e-7■■■□□ 16.8
RTN4-202ENST00000337526 OTUD6AQ7L8S5 288 aa15.07■□□□□ 0
RTN4-202ENST00000337526 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
RTN4-202ENST00000337526 PANX2Q96RD6 677 aa15.07■□□□□ 0
RTN4-202ENST00000337526 PRPF3O43395 683 aaKnown RBP15.06■□□□□ 0
RTN4-202ENST00000337526 N4BP1O75113 896 aaKnown RBP15.06■□□□□ 0
RTN4-202ENST00000337526 CYP27A1Q02318 531 aa15.06■□□□□ 0
RTN4-202ENST00000337526 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
RTN4-202ENST00000337526 GJA3Q9Y6H8 435 aa15.06■□□□□ 0
RTN4-202ENST00000337526 K7ENM7 598 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms