RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 WDR66Q8TBY9 1149 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 PUS3Q9BZE2 481 aaKnown RBP14.57□□□□□ -0.08
COL2A1-201ENST00000337299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL2A1-201ENST00000337299 PACSIN2Q9UNF0 486 aaPredicted RBP14.57□□□□□ -0.08
COL2A1-201ENST00000337299 ATP6V0A2Q9Y487 856 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 MROH7-TTC4A0A0A0MT08 1334 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 SUN1O94901 812 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 TNNI2P48788 182 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 OR2W6PQ8NHA6 318 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PLEKHG1Q9ULL1 1385 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 KIF11P52732 1056 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 UAP1Q16222 522 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-201ENST00000337299 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PPP1R14CQ8TAE6 165 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 EHD2Q9NZN4 543 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PCDHA13Q9Y5I0 950 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 HECW2Q9P2P5 1572 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 A0A0G2JLW4 131 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PDHBP11177 359 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 LRRC23Q53EV4 343 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-201ENST00000337299 DZIP1Q86YF9 867 aaKnown RBP14.56□□□□□ -0.08
COL2A1-201ENST00000337299 RNPC3Q96LT9 517 aaKnown RBP14.56□□□□□ -0.08
COL2A1-201ENST00000337299 SH3GL3Q99963 347 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 EVI5O60447 810 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 PLCB3Q01970 1234 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 CAPN12Q6ZSI9 719 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 CEP128Q6ZU80 1094 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 EPN3Q9H201 632 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 CDHR2Q9BYE9 1310 aa14.56□□□□□ -0.08
COL2A1-201ENST00000337299 A0A0U1RQJ8 604 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 SPOPO43791 374 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 BAG2O95816 211 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 IRX1P78414 480 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-201ENST00000337299 NCAPHQ15003 741 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 CCDC13Q8IYE1 715 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 MB21D1Q8N884 522 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 IQCGQ9H095 443 aaKnown RBP14.55□□□□□ -0.08
COL2A1-201ENST00000337299 ZBED6P86452 979 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 AKNAD1Q5T1N1 836 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 PUS7LQ9H0K6 701 aaKnown RBP14.55□□□□□ -0.08
COL2A1-201ENST00000337299 IKBKGQ9Y6K9 419 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 CCNT1O60563 726 aaKnown RBP14.55□□□□□ -0.08
COL2A1-201ENST00000337299 MMEP08473 750 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 ZNF449Q6P9G9 518 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 CABP7Q86V35 215 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 SYCP3Q8IZU3 236 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 GDAP1Q8TB36 358 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 U2AF1L4Q8WU68 220 aaKnown RBP14.55□□□□□ -0.08
COL2A1-201ENST00000337299 MS4A14Q96JA4 679 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 ATP6V1G3Q96LB4 118 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 ZIM3Q96PE6 472 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 PLCB1Q9NQ66 1216 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 COPRSQ9NQ92 184 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 OPHN1O60890 802 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 KRT15P19012 456 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 PTPREP23469 700 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 NUGGCQ68CJ6 796 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 MSANTD4Q8NCY6 345 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 RASGRP4Q8TDF6 673 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 OSBPL9Q96SU4 736 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 MTUS1Q9ULD2 1270 aa14.55□□□□□ -0.08
COL2A1-201ENST00000337299 LRRC7Q96NW7 1537 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 CCDC169A6NNP5 214 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 IRS4O14654 1257 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 MDH1P40925 334 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 CUL4BQ13620 913 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 ZSCAN29Q8IWY8 852 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 SUGP1Q8IWZ8 645 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 RAB17Q9H0T7 212 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 MMP1P03956 469 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 COL9A3Q14050 684 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 NSMCE1Q8WV22 266 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 USP6P35125 1406 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 hCG_2014768A0A024R1R8 64 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 MAGEB6P1A0A0J9YX57 407 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 SEL1L2Q5TEA6 688 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 CYB5D1Q6P9G0 228 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 TTLL7Q6ZT98 887 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 DDX23Q9BUQ8 820 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 G3BP2Q9UN86 482 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
COL2A1-201ENST00000337299 KDRP35968 1356 aa14.54□□□□□ -0.08
COL2A1-201ENST00000337299 ARHGEF40Q8TER5 1519 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 C6orf229H3BNL8 230 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms