RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 RUBCNQ92622 972 aa15.03■□□□□ -0
RC3H2-201ENST00000335387 RPGRIP1Q96KN7 1286 aa15.03■□□□□ -0
RC3H2-201ENST00000335387 RTFDC1Q9BY42 306 aaPredicted RBP15.03■□□□□ -0
RC3H2-201ENST00000335387 VIPAS39Q9H9C1 493 aa15.03■□□□□ -0
RC3H2-201ENST00000335387 KCNQ2O43526 872 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 USP17L8P0C7I0 530 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 PMS1P54277 932 aaKnown RBP15.02■□□□□ -0
RC3H2-201ENST00000335387 TEX35Q5T0J7 233 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 EXOC4Q96A65 974 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 MCM9Q9NXL9 1143 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 TAB2Q9NYJ8 693 aa15.02■□□□□ -0
RC3H2-201ENST00000335387 TTC26A0AVF1 554 aa15.02□□□□□ -0.01
RC3H2-201ENST00000335387 TARSL2A2RTX5 802 aaKnown RBP15.02□□□□□ -0.01
RC3H2-201ENST00000335387 CCNE1P24864 410 aa15.02□□□□□ -0.01
RC3H2-201ENST00000335387 KRT9P35527 623 aa15.02□□□□□ -0.01
RC3H2-201ENST00000335387 CCT6AP40227 531 aaKnown RBP15.02□□□□□ -0.01
RC3H2-201ENST00000335387 HERVK_113P62684 666 aa15.02□□□□□ -0.01
RC3H2-201ENST00000335387 NEDD1Q8NHV4 660 aa15.02□□□□□ -0.01
RC3H2-201ENST00000335387 ANO9A1A5B4 782 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 BICDL2A1A5D9 508 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 EIF3CLB5ME19 914 aaKnown RBP15.01□□□□□ -0.01
RC3H2-201ENST00000335387 PSMA7O14818 248 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 STIM1Q13586 685 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 PNKPQ96T60 521 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 SETDB2Q96T68 719 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 EIF3CQ99613 913 aaKnown RBP15.01□□□□□ -0.01
RC3H2-201ENST00000335387 ZNF287Q9HBT7 754 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 GAKO14976 1311 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 GPR75-ASB3A0A0A6YYF3 556 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 IL1R1P14778 569 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
RC3H2-201ENST00000335387 ITIH3Q06033 890 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 GRAPQ13588 217 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 MIIPQ5JXC2 388 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 EHBP1Q8NDI1 1231 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
RC3H2-201ENST00000335387 SH3RF3Q8TEJ3 882 aaPredicted RBP15.01□□□□□ -0.01
RC3H2-201ENST00000335387 TMEM47Q9BQJ4 181 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 TRIM9Q9C026 710 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 VPS16Q9H269 839 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 CCDC194A0A1B0GVG4 234 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 SLC26A4O43511 780 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 UBXN1Q04323 297 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 EHHADHQ08426 723 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 HDXQ7Z353 690 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 FAM114A1Q8IWE2 563 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 MTMR9Q96QG7 549 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 EPC1Q9H2F5 836 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 MYO6Q9UM54 1294 aa15.01□□□□□ -0.01
RC3H2-201ENST00000335387 RPS6KA5O75582 802 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 BAG3O95817 575 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 LDHBP07195 334 aaKnown RBP15□□□□□ -0.01
RC3H2-201ENST00000335387 OR52Z1P0C646 297 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 OAS2P29728 719 aaKnown RBP15□□□□□ -0.01
RC3H2-201ENST00000335387 FXR2P51116 673 aaKnown RBP eCLIP15□□□□□ -0.01
RC3H2-201ENST00000335387 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 P2RX5Q93086 422 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 NUP88Q99567 741 aaPredicted RBP15□□□□□ -0.01
RC3H2-201ENST00000335387 RIOX1Q9H6W3 641 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 ABL1P00519 1130 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 AARSP49588 968 aaKnown RBP eCLIP15□□□□□ -0.01
RC3H2-201ENST00000335387 KRT83P78385 493 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 ZBED6P86452 979 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 DZIP1Q86YF9 867 aaKnown RBP15□□□□□ -0.01
RC3H2-201ENST00000335387 STAMQ92783 540 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 GPKOWQ92917 476 aaPredicted RBP eCLIP15□□□□□ -0.01
RC3H2-201ENST00000335387 MMTAG2Q9BU76 263 aaKnown RBP15□□□□□ -0.01
RC3H2-201ENST00000335387 EXOC1Q9NV70 894 aa15□□□□□ -0.01
RC3H2-201ENST00000335387 BAZ2BQ9UIF8 2168 aaKnown RBP14.99□□□□□ -0.01
RC3H2-201ENST00000335387 MYO3BQ8WXR4 1341 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 ERLIN1O75477 346 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 LDHCP07864 332 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CHP1Q99653 195 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 LUC7L2Q9Y383 392 aaKnown RBP14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CTAGE15A4D2H0 777 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CTAGE8P0CG41 777 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 SNHG28P0DPA3 235 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CDC25AP30304 524 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CRY2Q49AN0 593 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CTAGE6Q86UF2 777 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CTAGE4Q8IX94 777 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 CPLX3Q8WVH0 158 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 STK17AQ9UEE5 414 aa14.99□□□□□ -0.01
RC3H2-201ENST00000335387 PVALEFA0A1B0GWK0 134 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 TULP2O00295 520 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 PRLRP16471 622 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 NBPF5PQ86XG9 351 aaPredicted RBP14.98□□□□□ -0.01
RC3H2-201ENST00000335387 IGKV6D-41A0A0C4DH26 115 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 MCM3P25205 808 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 GNA11P29992 359 aa14.98□□□□□ -0.01
RC3H2-201ENST00000335387 KIF4BQ2VIQ3 1234 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms