RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OPLAHO14841 1288 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 ATP2A1O14983 1001 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 JMYQ8N9B5 988 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 BTBD7Q9P203 1132 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 CCPG1Q9ULG6 757 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 CNMDO75829 334 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 OAZ1P54368 228 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 NR5A1Q13285 461 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 MCTP1Q6DN14 999 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 DAGLBQ8NCG7 672 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 PNMA3Q9UL41 463 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 PCDHA4Q9UN74 947 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 M0R2N6 131 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 CALML3P27482 149 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 TNFRSF25Q93038 417 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 TXNRD2Q9NNW7 524 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 RIPK3Q9Y572 518 aa24.72■■□□□ 1.55
TPM1-204ENST00000334895 CTDP1Q9Y5B0 961 aaPredicted RBP24.72■■□□□ 1.55
TPM1-204ENST00000334895 ABCB11O95342 1321 aa24.71■■□□□ 1.55
TPM1-204ENST00000334895 U2AF2P26368 475 aaKnown RBP eCLIP24.71■■□□□ 1.554e-8■■■■■ 38.8
TPM1-204ENST00000334895 KRT2P35908 639 aa24.71■■□□□ 1.55
TPM1-204ENST00000334895 MB21D1Q8N884 522 aa24.71■■□□□ 1.55
TPM1-204ENST00000334895 RBPJLQ9UBG7 517 aa24.71■■□□□ 1.55
TPM1-204ENST00000334895 SAFBQ15424 915 aaKnown RBP eCLIP24.7■■□□□ 1.54
TPM1-204ENST00000334895 SNRNP48Q6IEG0 339 aaKnown RBP24.7■■□□□ 1.54
TPM1-204ENST00000334895 GALNT17Q6IS24 598 aa24.7■■□□□ 1.54
TPM1-204ENST00000334895 BLIDQ8IZY5 108 aa24.7■■□□□ 1.54
TPM1-204ENST00000334895 RASGRP4Q8TDF6 673 aa24.7■■□□□ 1.54
TPM1-204ENST00000334895 FOXP1Q9H334 677 aaPredicted RBP24.7■■□□□ 1.54
TPM1-204ENST00000334895 C6orf50Q9HD87 102 aa24.7■■□□□ 1.54
TPM1-204ENST00000334895 RIC8AQ9NPQ8 531 aa24.7■■□□□ 1.54
TPM1-204ENST00000334895 ADCY7P51828 1080 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 INHBEP58166 350 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 TRAF1Q13077 416 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 NOM1Q5C9Z4 860 aaKnown RBP24.69■■□□□ 1.54
TPM1-204ENST00000334895 IFNL1Q8IU54 200 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 CLEC4DQ8WXI8 215 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 TNPO1Q92973 898 aaKnown RBP24.69■■□□□ 1.54
TPM1-204ENST00000334895 CHAMP1Q96JM3 812 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 TEX13BQ9BXU2 312 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 PSTPIP2Q9H939 334 aa24.69■■□□□ 1.54
TPM1-204ENST00000334895 MYH15Q9Y2K3 1946 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 ALAS1P13196 640 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 GNA11P29992 359 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 EARS2Q5JPH6 523 aaKnown RBP24.68■■□□□ 1.54
TPM1-204ENST00000334895 FAM173BQ6P4H8 233 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 PAGR1Q9BTK6 254 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 MRPL11Q9Y3B7 192 aaKnown RBP24.68■■□□□ 1.54
TPM1-204ENST00000334895 STAT3P40763 770 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 TM4SF4P48230 202 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 SREBF2Q12772 1141 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 MUM1L1Q5H9M0 696 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 CUL5Q93034 780 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 PARK7Q99497 189 aaKnown RBP24.68■■□□□ 1.54
TPM1-204ENST00000334895 ZCCHC17Q9NP64 241 aaKnown RBP24.68■■□□□ 1.54
TPM1-204ENST00000334895 HOMER2Q9NSB8 354 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 PNMA2Q9UL42 364 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 PCDHA6Q9UN73 950 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 RABGAP1Q9Y3P9 1069 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 PCDHA8Q9Y5H6 950 aa24.68■■□□□ 1.54
TPM1-204ENST00000334895 RBBP6Q7Z6E9 1792 aaKnown RBP24.67■■□□□ 1.54
TPM1-204ENST00000334895 FAM205CA6NFA0 338 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 NFIBO00712 420 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 MEIS2O14770 477 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 CLK2P49760 499 aaKnown RBP24.67■■□□□ 1.54
TPM1-204ENST00000334895 PLS1Q14651 629 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 UBE2SQ16763 222 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 USP17L6PQ6QN14 398 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 NOSTRINQ8IVI9 506 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 SMCR8Q8TEV9 937 aaPredicted RBP24.67■■□□□ 1.54
TPM1-204ENST00000334895 TBC1D5Q92609 795 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 SPATC1LQ9H0A9 340 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 ZSCAN16Q9H4T2 348 aaPredicted RBP24.67■■□□□ 1.54
TPM1-204ENST00000334895 BRMS1Q9HCU9 246 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 TMEM260Q9NX78 707 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 ADGRA2Q96PE1 1338 aa24.67■■□□□ 1.54
TPM1-204ENST00000334895 Q3C1V9 767 aa24.66■■□□□ 1.54
TPM1-204ENST00000334895 GTF3C2Q8WUA4 911 aaPredicted RBP24.66■■□□□ 1.54
TPM1-204ENST00000334895 TRERF1Q96PN7 1200 aa24.66■■□□□ 1.54
TPM1-204ENST00000334895 RNF146Q9NTX7 359 aa24.66■■□□□ 1.54
TPM1-204ENST00000334895 BIN2Q9UBW5 565 aaPredicted RBP24.66■■□□□ 1.54
TPM1-204ENST00000334895 MRPL12P52815 198 aaKnown RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 MAP2K1Q02750 393 aaPredicted RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 GNL2Q13823 731 aaKnown RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 FOXD4L6Q3SYB3 417 aaPredicted RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 FOXD4L3Q6VB84 417 aaPredicted RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 RIOX2Q8IUF8 465 aa24.65■■□□□ 1.54
TPM1-204ENST00000334895 REXO1Q8N1G1 1221 aaKnown RBP24.65■■□□□ 1.54
TPM1-204ENST00000334895 BICD2Q8TD16 824 aa24.65■■□□□ 1.54
TPM1-204ENST00000334895 R3HDMLQ9H3Y0 253 aa24.65■■□□□ 1.54
TPM1-204ENST00000334895 BRAPQ7Z569 592 aa24.64■■□□□ 1.54
TPM1-204ENST00000334895 MOV10L1Q9BXT6 1211 aaKnown RBP24.64■■□□□ 1.54
TPM1-204ENST00000334895 PIK3CDO00329 1044 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 GCLCP48506 637 aaPredicted RBP24.64■■□□□ 1.53
TPM1-204ENST00000334895 ERVK-9P63128 1117 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 ERVK-24P63145 666 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 GHRHRQ02643 423 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 TKFCQ3LXA3 575 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 JAKMIP3Q5VZ66 844 aa24.64■■□□□ 1.53
TPM1-204ENST00000334895 GLT8D2Q9H1C3 349 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms