RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 SYNGAP1Q96PV0 1343 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 ATP2A1O14983 1001 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 BMP3P12645 472 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 TFAP4Q01664 338 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 PPARAQ07869 468 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 IKQ13123 557 aaPredicted RBP10.47□□□□□ -0.73
BEST3-203ENST00000331471 C9orf50Q5SZB4 431 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 FAM109BQ6ICB4 259 aaPredicted RBP10.47□□□□□ -0.73
BEST3-203ENST00000331471 MKL1Q969V6 931 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
BEST3-203ENST00000331471 SLC38A10Q9HBR0 1119 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 STARD7Q9NQZ5 370 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 FBXO40Q9UH90 709 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 SYNPO2Q9UMS6 1093 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 SYNRGQ9UMZ2 1314 aa10.47□□□□□ -0.73
BEST3-203ENST00000331471 ADAMTS4O75173 837 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 RAG1P15918 1043 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 MX1P20591 662 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 OAZ1P54368 228 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 ACVR2BQ13705 512 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 CHST13Q8NET6 341 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 OTUD7AQ8TE49 926 aaPredicted RBP10.46□□□□□ -0.74
BEST3-203ENST00000331471 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 CHMP4CQ96CF2 233 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 TSEN34Q9BSV6 310 aaKnown RBP10.46□□□□□ -0.74
BEST3-203ENST00000331471 SPC25Q9HBM1 224 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 TMEM39AQ9NV64 488 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.46□□□□□ -0.74
BEST3-203ENST00000331471 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
BEST3-203ENST00000331471 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 MOXD2PA6NHM9 499 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 TSPY2A6NKD2 308 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 TMEM232C9JQI7 657 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
BEST3-203ENST00000331471 FDX1P10109 184 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 STAT2P52630 851 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 ACLYP53396 1101 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 KCNA10Q16322 511 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 ZMYM1Q5SVZ6 1142 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.74
BEST3-203ENST00000331471 GUCD1Q96NT3 240 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 CDHR5Q9HBB8 845 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 STX8Q9UNK0 236 aa10.45□□□□□ -0.74
BEST3-203ENST00000331471 DCDC2CA8MYV0 355 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
BEST3-203ENST00000331471 C6orf222P0C671 652 aaPredicted RBP10.44□□□□□ -0.74
BEST3-203ENST00000331471 SLC1A4P43007 532 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 CCDC129Q6ZRS4 1044 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 ARMCX2Q7L311 632 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 FAM160B2Q86V87 743 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 PCSK9Q8NBP7 692 aaKnown RBP10.44□□□□□ -0.74
BEST3-203ENST00000331471 KLHDC9Q8NEP7 349 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 CHURC1Q8WUH1 139 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 STAG1Q8WVM7 1258 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 VTI1AQ96AJ9 217 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 RNPC3Q96LT9 517 aaKnown RBP10.44□□□□□ -0.74
BEST3-203ENST00000331471 GLT1D1Q96MS3 346 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 ABHD16BQ9H3Z7 469 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 ACAD9Q9H845 621 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 UPF2Q9HAU5 1272 aaKnown RBP10.44□□□□□ -0.74
BEST3-203ENST00000331471 MTMR7Q9Y216 660 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
BEST3-203ENST00000331471 MROH7Q68CQ1 1323 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 MYADML2A6NDP7 307 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 KIAA0355O15063 1070 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 MCCP23508 829 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 ITGB8P26012 769 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 SMAD3P84022 425 aaKnown RBP10.43□□□□□ -0.74
BEST3-203ENST00000331471 FPGSQ05932 587 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 PDE4DQ08499 809 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 PTGDRQ13258 359 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 BECN1Q14457 450 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 CCDC144BQ3MJ40 725 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 ANKRD45Q5TZF3 282 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 CCDC174Q6PII3 467 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 NOL8Q76FK4 1167 aaKnown RBP10.43□□□□□ -0.74
BEST3-203ENST00000331471 CCDC144CPQ8IYA2 1237 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 TOX2Q96NM4 488 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 SMCHD1A6NHR9 2005 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 RANBP6O60518 1105 aaKnown RBP10.43□□□□□ -0.74
BEST3-203ENST00000331471 ASGR1P07306 291 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 ALAS1P13196 640 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 FAAP100Q0VG06 881 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 HIC1Q14526 733 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 CCDC96Q2M329 555 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 TKFCQ3LXA3 575 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 KCTD1Q719H9 257 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 ANKRD33Q7Z3H0 272 aa10.43□□□□□ -0.74
BEST3-203ENST00000331471 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms