RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 BLZF1Q9H2G9 400 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 ARFGEF2Q9Y6D5 1785 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 MYH13Q9UKX3 1938 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 ZAP70P43403 619 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 ZCRB1Q8TBF4 217 aaKnown RBP27.01■■□□□ 1.91
SOX1-201ENST00000330949 OSBPL7Q9BZF2 842 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 PPANQ9NQ55 473 aaKnown RBP27.01■■□□□ 1.91
SOX1-201ENST00000330949 PATL2C9JE40 543 aaKnown RBP27■■□□□ 1.91
SOX1-201ENST00000330949 IFIT3O14879 490 aaKnown RBP27■■□□□ 1.91
SOX1-201ENST00000330949 GTPBP6O43824 516 aaPredicted RBP27■■□□□ 1.91
SOX1-201ENST00000330949 ZBED6P86452 979 aa27■■□□□ 1.91
SOX1-201ENST00000330949 CYP27A1Q02318 531 aa27■■□□□ 1.91
SOX1-201ENST00000330949 IRF2BP1Q8IU81 584 aa27■■□□□ 1.91
SOX1-201ENST00000330949 GDF3Q9NR23 364 aa27■■□□□ 1.91
SOX1-201ENST00000330949 GMNCA6NCL1 334 aa27■■□□□ 1.91
SOX1-201ENST00000330949 HSPA2P54652 639 aa27■■□□□ 1.91
SOX1-201ENST00000330949 CDK17Q00537 523 aa27■■□□□ 1.91
SOX1-201ENST00000330949 XRCC4Q13426 336 aa27■■□□□ 1.91
SOX1-201ENST00000330949 RTN1Q16799 776 aa27■■□□□ 1.91
SOX1-201ENST00000330949 MAB21L3Q8N8X9 362 aa27■■□□□ 1.91
SOX1-201ENST00000330949 LRWD1Q9UFC0 647 aa27■■□□□ 1.91
SOX1-201ENST00000330949 CAPN6Q9Y6Q1 641 aa27■■□□□ 1.91
SOX1-201ENST00000330949 LAMB4A4D0S4 1761 aa27■■□□□ 1.91
SOX1-201ENST00000330949 GOLGA6L10A6NI86 522 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 DNM1LO00429 736 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 NFU1Q9UMS0 254 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 HOOK2Q96ED9 719 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 TTYH3Q9C0H2 523 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 SH2D4AQ9H788 454 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 AGPAT5Q9NUQ2 364 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 MYH10P35580 1976 aa26.99■■□□□ 1.91
SOX1-201ENST00000330949 NFRKBQ6P4R8 1299 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 ARMC9Q7Z3E5 817 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 CCDC42Q96M95 316 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 BATF3Q9NR55 127 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 FRMD3A2A2Y4 597 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 MAP2K1Q02750 393 aaPredicted RBP26.98■■□□□ 1.91
SOX1-201ENST00000330949 GRIK3Q13003 919 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 CCDC155Q8N6L0 562 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 PIK3R5Q8WYR1 880 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 MAGEC2Q9UBF1 373 aaPredicted RBP26.98■■□□□ 1.91
SOX1-201ENST00000330949 COL18A1P39060 1754 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 MGRN1O60291 552 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 LACTB2Q53H82 288 aaPredicted RBP26.98■■□□□ 1.91
SOX1-201ENST00000330949 FKBP15Q5T1M5 1219 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 WHAMMQ8TF30 809 aa26.98■■□□□ 1.91
SOX1-201ENST00000330949 ADAMTSL3P82987 1691 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 SRGNP10124 158 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 SCTRP47872 440 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 CARSP49589 748 aaKnown RBP26.97■■□□□ 1.91
SOX1-201ENST00000330949 CRACR2BQ8N4Y2 399 aaPredicted RBP26.97■■□□□ 1.91
SOX1-201ENST00000330949 SMCR8Q8TEV9 937 aaPredicted RBP26.97■■□□□ 1.91
SOX1-201ENST00000330949 THAP9Q9H5L6 903 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 RBM12Q9NTZ6 932 aaKnown RBP26.97■■□□□ 1.91
SOX1-201ENST00000330949 PRCPP42785 496 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 NBPF20Q3BBV1 942 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 ARMC2Q8NEN0 867 aa26.97■■□□□ 1.91
SOX1-201ENST00000330949 IFIH1Q9BYX4 1025 aaKnown RBP26.97■■□□□ 1.91
SOX1-201ENST00000330949 FAM153BP0C7A2 387 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 TBC1D8BQ0IIM8 1120 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 FAM153CQ494X1 144 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 RNF217Q8TC41 542 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 FAM153AQ9UHL3 310 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 BIRC2Q13490 618 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 RASSF8Q8NHQ8 419 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 EXOC1Q9NV70 894 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 RNF14Q9UBS8 474 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 SPATA31A3Q5VYP0 1347 aa26.96■■□□□ 1.91
SOX1-201ENST00000330949 CXCR5P32302 372 aa26.95■■□□□ 1.91
SOX1-201ENST00000330949 CACNA2D3Q8IZS8 1091 aa26.95■■□□□ 1.91
SOX1-201ENST00000330949 IFT81Q8WYA0 676 aa26.95■■□□□ 1.91
SOX1-201ENST00000330949 EPB41L5Q9HCM4 733 aa26.95■■□□□ 1.91
SOX1-201ENST00000330949 TRAPPC3O43617 180 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 RPN1P04843 607 aaKnown RBP26.95■■□□□ 1.9
SOX1-201ENST00000330949 GLI1P08151 1106 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 XBP1P17861 261 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 HPDP32754 393 aaPredicted RBP26.95■■□□□ 1.9
SOX1-201ENST00000330949 CFAP221Q4G0U5 840 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 MAATS1Q7Z4T9 603 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 ZSWIM5Q9P217 1185 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 MAPK8IP1Q9UQF2 711 aa26.95■■□□□ 1.9
SOX1-201ENST00000330949 HEXIM1O94992 359 aaKnown RBP26.94■■□□□ 1.9
SOX1-201ENST00000330949 MOCS3O95396 460 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 RPSAP08865 295 aaKnown RBP26.94■■□□□ 1.9
SOX1-201ENST00000330949 CCNHP51946 323 aaPredicted RBP26.94■■□□□ 1.9
SOX1-201ENST00000330949 PDXDC2PQ6P474 469 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 CCDC82Q8N4S0 544 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 SMARCAL1Q9NZC9 954 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 DNAJC8O75937 253 aaPredicted RBP26.94■■□□□ 1.9
SOX1-201ENST00000330949 CTDSPL2Q05D32 466 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 PSMB7Q99436 277 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 TMBIM4Q9HC24 238 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 INCENPQ9NQS7 918 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 GDAQ9Y2T3 454 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 ADD2P35612 726 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 GUCY2DQ02846 1103 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 SPRED3Q2MJR0 410 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 SEC16BQ96JE7 1060 aa26.94■■□□□ 1.9
SOX1-201ENST00000330949 MLXIPQ9HAP2 919 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms