RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 TRADDQ15628 312 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 MAGEC3Q8TD91 643 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 EPB41L5Q9HCM4 733 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 RWDD2AQ9UIY3 292 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 CAPN11Q9UMQ6 739 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 GDAQ9Y2T3 454 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 LEMD3Q9Y2U8 911 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 GLI3P10071 1580 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 KLHL33A6NCF5 533 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 ZPR1O75312 459 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 PARP1P09874 1014 aaKnown RBP20.25■□□□□ 0.83
SOCS3-201ENST00000330871 GUCY2DQ02846 1103 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 PARD3BQ8TEW8 1205 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 NSMCE1Q8WV22 266 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 GGA2Q9UJY4 613 aa20.25■□□□□ 0.83
SOCS3-201ENST00000330871 MYH10P35580 1976 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 STK36Q9NRP7 1315 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 ZNF263O14978 683 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 PLEKP08567 350 aaPredicted RBP20.24■□□□□ 0.83
SOCS3-201ENST00000330871 MCAMP43121 646 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 IRF2BP1Q8IU81 584 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 LMBR1Q8WVP7 490 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 WASF1Q92558 559 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 PURBQ96QR8 312 aaKnown RBP20.24■□□□□ 0.83
SOCS3-201ENST00000330871 XDHP47989 1333 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 GMNCA6NCL1 334 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 BUB1BO60566 1050 aaPredicted RBP20.24■□□□□ 0.83
SOCS3-201ENST00000330871 DNA2P51530 1060 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 KCNB1Q14721 858 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 NOD2Q9HC29 1040 aa20.24■□□□□ 0.83
SOCS3-201ENST00000330871 SPATS2LQ9NUQ6 558 aaKnown RBP20.24■□□□□ 0.83
SOCS3-201ENST00000330871 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 FMNL1O95466 1100 aaPredicted RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 IFIT5Q13325 482 aaKnown RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 UBE3CQ15386 1083 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 SEC16BQ96JE7 1060 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 AATFQ9NY61 560 aaKnown RBP eCLIP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 NUP188Q5SRE5 1749 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 ATP6V1G2O95670 118 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 TRIM21P19474 475 aaKnown RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 LIFRP42702 1097 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 HIBCHQ6NVY1 386 aaPredicted RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
SOCS3-201ENST00000330871 OR2W6PQ8NHA6 318 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 ZBTB10Q96DT7 871 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 CEP131Q9UPN4 1083 aa20.23■□□□□ 0.83
SOCS3-201ENST00000330871 WNT7AO00755 349 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 AP1G2O75843 785 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 HEXIM1O94992 359 aaKnown RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 AP1ARQ63HQ0 302 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 ZNHIT6Q9NWK9 470 aaKnown RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 PLAAQ9Y263 795 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 SLC12A7Q9Y666 1083 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 MGRN1O60291 552 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 TACC1O75410 805 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 SLC8A3P57103 927 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 BYSLQ13895 437 aaKnown RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 KCTD19Q17RG1 926 aaPredicted RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 EARS2Q5JPH6 523 aaKnown RBP20.22■□□□□ 0.83
SOCS3-201ENST00000330871 MSL1Q68DK7 614 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 ZNF662Q6ZS27 426 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 ANKRD13CQ8N6S4 541 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 TRIM58Q8NG06 486 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 L3MBTL1Q9Y468 752 aa20.22■□□□□ 0.83
SOCS3-201ENST00000330871 B4DLN1 442 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 ELF3P78545 371 aaPredicted RBP20.21■□□□□ 0.83
SOCS3-201ENST00000330871 XRCC4Q13426 336 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 MEA1Q16626 185 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 EMC10Q5UCC4 262 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 IFT20Q8IY31 132 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 RUBCNQ92622 972 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 HVCN1Q96D96 273 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 PCMTD1Q96MG8 357 aaPredicted RBP20.21■□□□□ 0.83
SOCS3-201ENST00000330871 LGALS16A8MUM7 142 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 CSF1RP07333 972 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 IFNAR1P17181 557 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 PRCPP42785 496 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 PAFAH1B1P43034 410 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
SOCS3-201ENST00000330871 PPP1R7Q15435 360 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 METTL24Q5JXM2 366 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 RCSD1Q6JBY9 416 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 ZNF572Q7Z3I7 529 aaPredicted RBP20.21■□□□□ 0.83
SOCS3-201ENST00000330871 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
SOCS3-201ENST00000330871 ZNF512BQ96KM6 892 aaPredicted RBP20.21■□□□□ 0.83
SOCS3-201ENST00000330871 ADAMTSL3P82987 1691 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 HMGB1P1B2RPK0 211 aaPredicted RBP20.2■□□□□ 0.82
SOCS3-201ENST00000330871 IDH1O75874 414 aaKnown RBP20.2■□□□□ 0.82
SOCS3-201ENST00000330871 ITIH3Q06033 890 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 NUP58Q9BVL2 599 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 PLA2G12BQ9BX93 195 aa20.2■□□□□ 0.82
SOCS3-201ENST00000330871 HYOU1Q9Y4L1 999 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms