RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 PTPROQ16827 1216 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 SHROOM1Q2M3G4 852 aaPredicted RBP21.17■□□□□ 0.98
SPSB1-201ENST00000328089 TTBK2Q6IQ55 1244 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 CCDC102AQ96A19 550 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 CD209Q9NNX6 404 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 RMND1Q9NWS8 449 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 BARHL2Q9NY43 387 aa21.17■□□□□ 0.98
SPSB1-201ENST00000328089 MYO1BO43795 1136 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 FGRP09769 529 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 PBX1P40424 430 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 KCTD1Q719H9 257 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 CAGE1Q8TC20 777 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 NOC4LQ9BVI4 516 aaKnown RBP21.16■□□□□ 0.98
SPSB1-201ENST00000328089 PDE11AQ9HCR9 933 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 TNNT3P45378 269 aaPredicted RBP21.16■□□□□ 0.98
SPSB1-201ENST00000328089 CCDC96Q2M329 555 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 DPP8Q6V1X1 898 aaPredicted RBP21.16■□□□□ 0.98
SPSB1-201ENST00000328089 ADSSL1Q8N142 457 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 GPR161Q8N6U8 529 aaKnown RBP21.16■□□□□ 0.98
SPSB1-201ENST00000328089 RRP36Q96EU6 259 aaKnown RBP21.16■□□□□ 0.98
SPSB1-201ENST00000328089 NUDT12Q9BQG2 462 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 JADE2Q9NQC1 790 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 CDC23Q9UJX2 597 aa21.16■□□□□ 0.98
SPSB1-201ENST00000328089 NDUFA10O95299 355 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 NAP1L1P55209 391 aaKnown RBP21.15■□□□□ 0.98
SPSB1-201ENST00000328089 GRM4Q14833 912 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 NONOQ15233 471 aaKnown RBP eCLIP21.15■□□□□ 0.98
SPSB1-201ENST00000328089 TMTC1Q8IUR5 882 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 MB21D1Q8N884 522 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 NAPGQ99747 312 aaPredicted RBP21.15■□□□□ 0.98
SPSB1-201ENST00000328089 TRIM34Q9BYJ4 488 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 NID2Q14112 1375 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 OR52Z1P0C646 297 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 CXCR5P32302 372 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 SRGAP1Q7Z6B7 1085 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 CRACR2AQ9BSW2 395 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 ABCB6Q9NP58 842 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 LMAN1P49257 510 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 GABPB1Q06547 395 aaPredicted RBP21.15■□□□□ 0.98
SPSB1-201ENST00000328089 CCDC148Q8NFR7 591 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 OR8K1Q8NGG5 319 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 CNOT6LQ96LI5 555 aaKnown RBP21.15■□□□□ 0.98
SPSB1-201ENST00000328089 LACRTQ9GZZ8 138 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 SMARCAL1Q9NZC9 954 aa21.15■□□□□ 0.98
SPSB1-201ENST00000328089 G3V3G9 751 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 SEMA3EO15041 775 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 VSNL1P62760 191 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 GRAPQ13588 217 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 SLC10A5Q5PT55 438 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 DCAF8Q5TAQ9 597 aa21.14■□□□□ 0.98
SPSB1-201ENST00000328089 GRAPLQ8TC17 118 aaPredicted RBP21.14■□□□□ 0.98
SPSB1-201ENST00000328089 PCNTO95613 3336 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 CTAGE15A4D2H0 777 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 ZRANB2O95218 330 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPSB1-201ENST00000328089 CTAGE8P0CG41 777 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 TRAPPC10P48553 1259 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 CTAGE6Q86UF2 777 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 CTAGE4Q8IX94 777 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 NELFCDQ8IXH7 590 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 ELOA2Q8IYF1 753 aaPredicted RBP21.14■□□□□ 0.97
SPSB1-201ENST00000328089 VPS18Q9P253 973 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 LIMA1Q9UHB6 759 aaKnown RBP21.14■□□□□ 0.97
SPSB1-201ENST00000328089 USP21Q9UK80 565 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 REXO2Q9Y3B8 237 aaKnown RBP21.14■□□□□ 0.97
SPSB1-201ENST00000328089 MYH6P13533 1939 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 CHD4Q14839 1912 aa21.14■□□□□ 0.97
SPSB1-201ENST00000328089 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 SLC37A4O43826 429 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 ATP1A1P05023 1023 aaKnown RBP21.13■□□□□ 0.97
SPSB1-201ENST00000328089 APBA1Q02410 837 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 SBK1Q52WX2 424 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 REXO1Q8N1G1 1221 aaKnown RBP21.13■□□□□ 0.97
SPSB1-201ENST00000328089 RCCD1A6NED2 376 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 C6orf50Q9HD87 102 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 ECM29Q5VYK3 1845 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 IPO7O95373 1038 aaKnown RBP21.13■□□□□ 0.97
SPSB1-201ENST00000328089 RBM5P52756 815 aaKnown RBP eCLIP21.13■□□□□ 0.97
SPSB1-201ENST00000328089 SPAG1Q07617 926 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 PRR5LQ6MZQ0 368 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 NEK8Q86SG6 692 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 ANKZF1Q9H8Y5 726 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 LRRC4BQ9NT99 713 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 LRWD1Q9UFC0 647 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 POLLQ9UGP5 575 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 GGA1Q9UJY5 639 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 DUOX1Q9NRD9 1551 aa21.13■□□□□ 0.97
SPSB1-201ENST00000328089 H7C1D1 291 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 TUBB4AP04350 444 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 AKR1B1P15121 316 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 ARHGAP25P42331 645 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 RNASE9P60153 205 aaKnown RBP21.12■□□□□ 0.97
SPSB1-201ENST00000328089 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
SPSB1-201ENST00000328089 TRIM9Q9C026 710 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 NLRC4Q9NPP4 1024 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 STRCQ7RTU9 1775 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 FLT1P17948 1338 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 H3BQF6 201 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 KLRC4O43908 158 aa21.12■□□□□ 0.97
SPSB1-201ENST00000328089 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms