RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CHURC1Q8WUH1 139 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 FAM161BQ96MY7 647 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 GUCD1Q96NT3 240 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 IL25Q9H293 177 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 GPCPD1Q9NPB8 672 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 CYP39A1Q9NYL5 469 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 CDH23Q9H251 3354 aa14.58□□□□□ -0.08
TPM3-204ENST00000323144 KIAA1217Q5T5P2 1943 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 MOXD2PA6NHM9 499 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 ICAM1P05362 532 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 ASGR1P07306 291 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 FDX1P10109 184 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 PDHBP11177 359 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
TPM3-204ENST00000323144 NSMFQ6X4W1 530 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 ZKSCAN3Q9BRR0 538 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 ABHD16BQ9H3Z7 469 aa14.57□□□□□ -0.08
TPM3-204ENST00000323144 KIAA0355O15063 1070 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 GJA9P57773 515 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 FAAP100Q0VG06 881 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 TKFCQ3LXA3 575 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 EEPD1Q7L9B9 569 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 TLK2Q86UE8 772 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 TSEN34Q9BSV6 310 aaKnown RBP14.56□□□□□ -0.08
TPM3-204ENST00000323144 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 TBX21Q9UL17 535 aa14.56□□□□□ -0.08
TPM3-204ENST00000323144 SCN5AQ14524 2016 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 CWC27Q6UX04 472 aaKnown RBP14.55□□□□□ -0.08
TPM3-204ENST00000323144 BTNL9Q6UXG8 535 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 RWDD1Q9H446 243 aaPredicted RBP14.55□□□□□ -0.08
TPM3-204ENST00000323144 OSBPL3Q9H4L5 887 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 PDGFCQ9NRA1 345 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 DIAPH3Q9NSV4 1193 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 UNC80Q8N2C7 3258 aa14.55□□□□□ -0.08
TPM3-204ENST00000323144 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
TPM3-204ENST00000323144 RAG1P15918 1043 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 SMPD1P17405 629 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 PDE4AP27815 886 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 ALDH5A1P51649 535 aaPredicted RBP14.54□□□□□ -0.08
TPM3-204ENST00000323144 TNFAIP2Q03169 654 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 ZNF543Q08ER8 600 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 AAMPQ13685 434 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 NUP133Q8WUM0 1156 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
TPM3-204ENST00000323144 GLT1D1Q96MS3 346 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 TMEM39AQ9NV64 488 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 GNEQ9Y223 722 aaKnown RBP14.54□□□□□ -0.08
TPM3-204ENST00000323144 STXBP5LQ9Y2K9 1186 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 SCN10AQ9Y5Y9 1956 aa14.54□□□□□ -0.08
TPM3-204ENST00000323144 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
TPM3-204ENST00000323144 ASB14A6NK59 587 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 SNHG28P0DPA3 235 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 FPGSQ05932 587 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 BAATQ14032 418 aaPredicted RBP14.53□□□□□ -0.08
TPM3-204ENST00000323144 TAPT1Q6NXT6 567 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 CXCL17Q6UXB2 119 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 MFSD6Q6ZSS7 791 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 FAM126BQ8IXS8 530 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
TPM3-204ENST00000323144 ELP1O95163 1332 aa14.52□□□□□ -0.08
TPM3-204ENST00000323144 UMODL1Q5DID0 1318 aa14.52□□□□□ -0.08
TPM3-204ENST00000323144 PTPDC1A2A3K4 754 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 DCDC2CA8MYV0 355 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 B4E1Z4 1266 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 KDM4AO75164 1064 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 NKX3-2P78367 333 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 IRX6P78412 446 aaPredicted RBP14.52□□□□□ -0.09
TPM3-204ENST00000323144 GNASQ5JWF2 1037 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 ZNF697Q5TEC3 545 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 NOL8Q76FK4 1167 aaKnown RBP14.52□□□□□ -0.09
TPM3-204ENST00000323144 TICAM2Q86XR7 235 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 PCSK9Q8NBP7 692 aaKnown RBP14.52□□□□□ -0.09
TPM3-204ENST00000323144 MORC4Q8TE76 937 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 PPP1R12CQ9BZL4 782 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 TTYH1Q9H313 450 aaPredicted RBP14.52□□□□□ -0.09
TPM3-204ENST00000323144 SPC25Q9HBM1 224 aa14.52□□□□□ -0.09
TPM3-204ENST00000323144 COL4A4P53420 1690 aaPredicted RBP14.52□□□□□ -0.09
TPM3-204ENST00000323144 PRUNE2Q8WUY3 3088 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 TNKSO95271 1327 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 MROH7Q68CQ1 1323 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 WDR19Q8NEZ3 1342 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 PCP11498 1178 aaKnown RBP14.51□□□□□ -0.09
TPM3-204ENST00000323144 CALML3P27482 149 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 CDK7P50613 346 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
TPM3-204ENST00000323144 PSMC6P62333 389 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
TPM3-204ENST00000323144 USH1GQ495M9 461 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 FAM109BQ6ICB4 259 aaPredicted RBP14.51□□□□□ -0.09
TPM3-204ENST00000323144 SLC17A8Q8NDX2 589 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 ESR2Q92731 530 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 TOX2Q96NM4 488 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
TPM3-204ENST00000323144 VTA1Q9NP79 307 aa14.51□□□□□ -0.09
TPM3-204ENST00000323144 GRIN2DO15399 1336 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms