RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 LGALS16A8MUM7 142 aa19.52■□□□□ 0.72
COL9A1-201ENST00000320755 NKRFO15226 690 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL9A1-201ENST00000320755 ANKRD40Q6AI12 368 aa19.52■□□□□ 0.72
COL9A1-201ENST00000320755 LRRC47Q8N1G4 583 aaKnown RBP19.52■□□□□ 0.72
COL9A1-201ENST00000320755 GIMAP8Q8ND71 665 aaPredicted RBP19.52■□□□□ 0.72
COL9A1-201ENST00000320755 ZMYND12Q9H0C1 365 aa19.52■□□□□ 0.72
COL9A1-201ENST00000320755 SLC39A2Q9NP94 309 aa19.52■□□□□ 0.72
COL9A1-201ENST00000320755 RHOBTB3O94955 611 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 MTIF2P46199 727 aaKnown RBP19.52■□□□□ 0.71
COL9A1-201ENST00000320755 TBC1D8BQ0IIM8 1120 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 MCM6Q14566 821 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 NCAPH2Q6IBW4 605 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 NEK8Q86SG6 692 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 POTEDQ86YR6 584 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.71
COL9A1-201ENST00000320755 RIMBP2O15034 1052 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 GYS2P54840 703 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 TRIM14Q14142 442 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 LONRF2Q1L5Z9 754 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 GALNT17Q6IS24 598 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 PRR5LQ6MZQ0 368 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 DYMQ7RTS9 669 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 KRT25Q7Z3Z0 450 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 CEP112Q8N8E3 955 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 TRIM9Q9C026 710 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 GPCPD1Q9NPB8 672 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 HDAC6Q9UBN7 1215 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 REXO2Q9Y3B8 237 aaKnown RBP19.51■□□□□ 0.71
COL9A1-201ENST00000320755 FLT1P17948 1338 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 GNA11P29992 359 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 VPS72Q15906 364 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 TTI2Q6NXR4 508 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 DAGLBQ8NCG7 672 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 PNKPQ96T60 521 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 GGA1Q9UJY5 639 aa19.51■□□□□ 0.71
COL9A1-201ENST00000320755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 ATP2B2Q01814 1243 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 SMC1AQ14683 1233 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 KCNB1Q14721 858 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 DUSP9Q99956 384 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 SUGCTQ9HAC7 445 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 EP400Q96L91 3159 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 RAD21O60216 631 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 OAS2P29728 719 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 REXO1Q8N1G1 1221 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 NEDD1Q8NHV4 660 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 ANKZF1Q9H8Y5 726 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 LAMB1P07942 1786 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 EEF1GP26641 437 aaKnown RBP19.5■□□□□ 0.71
COL9A1-201ENST00000320755 CCDC122Q5T0U0 273 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 C16orf86Q6ZW13 317 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 LZTS2Q9BRK4 669 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 SPZ1Q9BXG8 430 aa19.5■□□□□ 0.71
COL9A1-201ENST00000320755 KIAA1328Q86T90 577 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 P2RX5Q93086 422 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 CNOT6LQ96LI5 555 aaKnown RBP19.49■□□□□ 0.71
COL9A1-201ENST00000320755 THAP9Q9H5L6 903 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 GPR75-ASB3A0A0A6YYF3 556 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 CTAGE15A4D2H0 777 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 CTAGE8P0CG41 777 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 IDEP14735 1019 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 GTF2IP78347 998 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 WDR59Q6PJI9 974 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 CTAGE6Q86UF2 777 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 CTAGE4Q8IX94 777 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 ZNF507Q8TCN5 953 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 GJA10Q969M2 543 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 NOC4LQ9BVI4 516 aaKnown RBP19.49■□□□□ 0.71
COL9A1-201ENST00000320755 FUT8Q9BYC5 575 aa19.49■□□□□ 0.71
COL9A1-201ENST00000320755 LAD1O00515 517 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 SRGAP2O75044 1071 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 FECHP22830 423 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 CYP27A1Q02318 531 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 USP21Q9UK80 565 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 DNM2P50570 870 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 NOA1Q8NC60 698 aaKnown RBP19.48■□□□□ 0.71
COL9A1-201ENST00000320755 CALML4Q96GE6 196 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 CAPZA3Q96KX2 299 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 POLLQ9UGP5 575 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 MYO6Q9UM54 1294 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 ROBO3Q96MS0 1386 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 SLURP2P0DP57 97 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 PRPHP41219 470 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 DHTKD1Q96HY7 919 aaPredicted RBP19.48■□□□□ 0.71
COL9A1-201ENST00000320755 CDK5RAP3Q96JB5 506 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 MMTAG2Q9BU76 263 aaKnown RBP19.48■□□□□ 0.71
COL9A1-201ENST00000320755 LRWD1Q9UFC0 647 aa19.48■□□□□ 0.71
COL9A1-201ENST00000320755 POTEMA6NI47 508 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 TDP2O95551 362 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 CCNE1P24864 410 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 RHBDL3P58872 404 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 LRRC4BQ9NT99 713 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 CAPN11Q9UMQ6 739 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 TNNI2P48788 182 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 DUSP10Q9Y6W6 482 aa19.47■□□□□ 0.71
COL9A1-201ENST00000320755 RGL2O15211 777 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 CALCRLQ16602 461 aa19.46■□□□□ 0.71
COL9A1-201ENST00000320755 TMED8Q6PL24 325 aaPredicted RBP19.46■□□□□ 0.71
COL9A1-201ENST00000320755 AK8Q96MA6 479 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms