RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 CPVLQ9H3G5 476 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 ZNF70Q9UC06 446 aaPredicted RBP17.95■□□□□ 0.46
USH1C-202ENST00000318024 SWAP70Q9UH65 585 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 RAB21Q9UL25 225 aa17.95■□□□□ 0.46
USH1C-202ENST00000318024 FOCADQ5VW36 1801 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 EGFRP00533 1210 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 ATP2B2Q01814 1243 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 GNL2Q13823 731 aaKnown RBP17.94■□□□□ 0.46
USH1C-202ENST00000318024 LRRC47Q8N1G4 583 aaKnown RBP17.94■□□□□ 0.46
USH1C-202ENST00000318024 WASF1Q92558 559 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 SHISA4Q96DD7 197 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 TRIM34Q9BYJ4 488 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 VPS54Q9P1Q0 977 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 ADAM21Q9UKJ8 722 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 NFE2L3Q9Y4A8 694 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
USH1C-202ENST00000318024 NT5C2P49902 561 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 BEND6Q5SZJ8 279 aaPredicted RBP17.94■□□□□ 0.46
USH1C-202ENST00000318024 USP17L2Q6R6M4 530 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 ARHGAP27Q6ZUM4 889 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 SPATA20Q8TB22 786 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 CSRNP1Q96S65 589 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 ANKZF1Q9H8Y5 726 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 TMOD2Q9NZR1 351 aa17.94■□□□□ 0.46
USH1C-202ENST00000318024 BAZ2BQ9UIF8 2168 aaKnown RBP17.93■□□□□ 0.46
USH1C-202ENST00000318024 A0A1B0GTH6 734 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 PRPF3O43395 683 aaKnown RBP17.93■□□□□ 0.46
USH1C-202ENST00000318024 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 KIF5BP33176 963 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 GPS2Q13227 327 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 MTF1Q14872 753 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 ZSCAN26Q16670 478 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 CDAN1Q8IWY9 1227 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 MLKLQ8NB16 471 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 MSANTD4Q8NCY6 345 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 TRERF1Q96PN7 1200 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 DESI2Q9BSY9 194 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 IRX2Q9BZI1 471 aaPredicted RBP17.93■□□□□ 0.46
USH1C-202ENST00000318024 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
USH1C-202ENST00000318024 VGLL3A8MV65 326 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 BTBD18B2RXH4 712 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 WNT10BO00744 389 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 TOB1P50616 345 aaPredicted RBP17.92■□□□□ 0.46
USH1C-202ENST00000318024 TNIP1Q15025 636 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 KRI1Q8N9T8 703 aaKnown RBP17.92■□□□□ 0.46
USH1C-202ENST00000318024 PANX2Q96RD6 677 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 EHD4Q9H223 541 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 MYOZ2Q9NPC6 264 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 FER1L6Q2WGJ9 1857 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 ENTPD3O75355 529 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 GDF11O95390 407 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 CDK11BP21127 795 aaKnown RBP17.92■□□□□ 0.46
USH1C-202ENST00000318024 PTPREP23469 700 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 PBX1P40424 430 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 GRIN1Q05586 938 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 POSTNQ15063 836 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 CERKLQ49MI3 558 aaPredicted RBP17.92■□□□□ 0.46
USH1C-202ENST00000318024 HSP90AA4PQ58FG1 418 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 FBXO2Q9UK22 296 aaPredicted RBP17.92■□□□□ 0.46
USH1C-202ENST00000318024 ADGRG1Q9Y653 693 aa17.92■□□□□ 0.46
USH1C-202ENST00000318024 USP17L5A8MUK1 530 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 MMP1P03956 469 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 GYS2P54840 703 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 NR5A1Q13285 461 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 GRM4Q14833 912 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 KARSQ15046 597 aaKnown RBP17.91■□□□□ 0.46
USH1C-202ENST00000318024 SLC35G1Q2M3R5 365 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 RAD9BQ6WBX8 426 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 PDILTQ8N807 584 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 TRIML1Q8N9V2 468 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 OXER1Q8TDS5 423 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 TMEM39BQ9GZU3 492 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
USH1C-202ENST00000318024 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 SAMD7Q7Z3H4 446 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
USH1C-202ENST00000318024 GOLGA5Q8TBA6 731 aa17.91■□□□□ 0.46
USH1C-202ENST00000318024 CCDC12Q8WUD4 166 aaPredicted RBP17.91■□□□□ 0.46
USH1C-202ENST00000318024 SAMSN1Q9NSI8 373 aaKnown RBP17.91■□□□□ 0.46
USH1C-202ENST00000318024 IGKV6D-41A0A0C4DH26 115 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 A0A0U1RQJ8 604 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 CYTH3O43739 400 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 RAD21O60216 631 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 FECHP22830 423 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 GMPSP49915 693 aaPredicted RBP17.9■□□□□ 0.46
USH1C-202ENST00000318024 ATRIPQ8WXE1 791 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 CDC23Q9UJX2 597 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 FRMPD2Q68DX3 1309 aaPredicted RBP17.9■□□□□ 0.46
USH1C-202ENST00000318024 SOWAHDA6NJG2 315 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 TTLL1O95922 423 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 CHMP4BP1P59074 171 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
USH1C-202ENST00000318024 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
USH1C-202ENST00000318024 VAT1LQ9HCJ6 419 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms