RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CXCL9Q07325 125 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 QRICH1Q2TAL8 776 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 SPDYE2Q495Y8 402 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 RRAGBQ5VZM2 374 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 GMCL1P1Q8NEA9 526 aa20.77■□□□□ 0.92
CCDC43-201ENST00000315286 NUP88Q99567 741 aaPredicted RBP20.77■□□□□ 0.92
CCDC43-201ENST00000315286 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 NDUFB10O96000 172 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 ORC2Q13416 577 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-201ENST00000315286 HSP90AA4PQ58FG1 418 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 SMYD4Q8IYR2 804 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-201ENST00000315286 RASSF8Q8NHQ8 419 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 CUL5Q93034 780 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 NAP1L5Q96NT1 182 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-201ENST00000315286 PLIN2Q99541 437 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 CNTNAP1P78357 1384 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 TECP42680 631 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 MRPL12P52815 198 aaKnown RBP20.76■□□□□ 0.91
CCDC43-201ENST00000315286 TMC6Q7Z403 805 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 AGBL3Q8NEM8 1001 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 AK8Q96MA6 479 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 IMPACTQ9P2X3 320 aa20.76■□□□□ 0.91
CCDC43-201ENST00000315286 A0A1W2PRG0 241 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 PPP1R3GB7ZBB8 358 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 TDP2O95551 362 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 ZNF18P17022 549 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 TNNI2P48788 182 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-201ENST00000315286 DALRD3Q5D0E6 543 aaKnown RBP20.75■□□□□ 0.91
CCDC43-201ENST00000315286 CT47A1Q5JQC4 288 aaPredicted RBP20.75■□□□□ 0.91
CCDC43-201ENST00000315286 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 MTMR9Q96QG7 549 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 VEZTQ9HBM0 779 aa20.75■□□□□ 0.91
CCDC43-201ENST00000315286 KLHL10Q6JEL2 608 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 LRRC15Q8TF66 581 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 PCDHA1Q9Y5I3 950 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 MYH7BA7E2Y1 1941 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 CBFA2T2O43439 604 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 SLC37A4O43826 429 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 CABP7Q86V35 215 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 MTMR14Q8NCE2 650 aa20.74■□□□□ 0.91
CCDC43-201ENST00000315286 SAMSN1Q9NSI8 373 aaKnown RBP20.74■□□□□ 0.91
CCDC43-201ENST00000315286 TXKP42681 527 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 GSDMDP57764 484 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 CALCRLQ16602 461 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 CDAN1Q8IWY9 1227 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 RPN1P04843 607 aaKnown RBP20.73■□□□□ 0.91
CCDC43-201ENST00000315286 POLD1P28340 1107 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 STX17P56962 302 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 SNAP25P60880 206 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 IGSF22Q8N9C0 903 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 TMEM39BQ9GZU3 492 aa20.73■□□□□ 0.91
CCDC43-201ENST00000315286 R3HCC1Q9Y3T6 440 aaKnown RBP20.73■□□□□ 0.91
CCDC43-201ENST00000315286 FER1L6Q2WGJ9 1857 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 TMEM232C9JQI7 657 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 BMP3P12645 472 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 PLCG1P19174 1290 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 CDK11BP21127 795 aaKnown RBP20.72■□□□□ 0.91
CCDC43-201ENST00000315286 FKBP1CQ5VVH2 108 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 TAOK3Q9H2K8 898 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 KBTBD4Q9NVX7 518 aa20.72■□□□□ 0.91
CCDC43-201ENST00000315286 PPP1R1BQ9UD71 204 aaPredicted RBP20.72■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L15C9J2P7 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L13C9JLJ4 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L11C9JVI0 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L18D6R9N7 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L22D6RA61 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L17D6RBQ6 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L19D6RCP7 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L20D6RJB6 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 ECE1P42892 770 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 CCZ1BP86790 482 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 CCZ1P86791 482 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L24Q0WX57 530 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 DNTTIP2Q5QJE6 756 aaKnown RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SPATA1Q5VX52 437 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 USP17L6PQ6QN14 398 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SPICE1Q8N0Z3 855 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 MMTAG2Q9BU76 263 aaKnown RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 MTFR1LQ9H019 292 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 INTS13Q9NVM9 706 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 BRCA1P38398 1863 aaKnown RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SHTN1A0MZ66 631 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SKILP12757 684 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 IKQ13123 557 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SYDE2Q5VT97 1194 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 CIAPIN1Q6FI81 312 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 PPP4R3AQ6IN85 833 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 ACER1Q8TDN7 264 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 ZBED3Q96IU2 234 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-201ENST00000315286 RMND1Q9NWS8 449 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 SYNRGQ9UMZ2 1314 aa20.71■□□□□ 0.91
CCDC43-201ENST00000315286 WNT10BO00744 389 aa20.7■□□□□ 0.9
CCDC43-201ENST00000315286 ZNF658Q5TYW1 1059 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-201ENST00000315286 ARMCX5Q6P1M9 558 aa20.7■□□□□ 0.9
CCDC43-201ENST00000315286 MIGA2Q7L4E1 593 aa20.7■□□□□ 0.9
CCDC43-201ENST00000315286 JDP2Q8WYK2 163 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms