RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 ANTXR2P58335 489 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 RNASE9P60153 205 aaKnown RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 LRRC41Q15345 812 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 DALRD3Q5D0E6 543 aaKnown RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 CCDC181Q5TID7 509 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 EPC1Q9H2F5 836 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 SLC39A2Q9NP94 309 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 ZSCAN20P17040 1043 aaPredicted RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 PRPF4BQ13523 1007 aaKnown RBP11.1□□□□□ -0.63
GPHN-201ENST00000315266 ALX1Q15699 326 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 RUFY1Q96T51 708 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 CUTAO60888 179 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 IGSF22Q8N9C0 903 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
GPHN-201ENST00000315266 AKR1B1P15121 316 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
GPHN-201ENST00000315266 TMEM260Q9NX78 707 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
GPHN-201ENST00000315266 PCP11498 1178 aaKnown RBP11.09□□□□□ -0.63
GPHN-201ENST00000315266 SPA17Q15506 151 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 SARM1Q6SZW1 724 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 USP49Q70CQ1 688 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 CABP7Q86V35 215 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 RGS22Q8NE09 1264 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 GOLGA1Q92805 767 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 MTFR1LQ9H019 292 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 GUCA1BQ9UMX6 200 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 IFNAR1P17181 557 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 GRIK5Q16478 980 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 PPP2R2CQ9Y2T4 447 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 CCDC169A6NNP5 214 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
GPHN-201ENST00000315266 SV2BQ7L1I2 683 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
GPHN-201ENST00000315266 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
GPHN-201ENST00000315266 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 NFIAQ12857 509 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 RAPGEF1Q13905 1077 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 UTP14CQ5TAP6 766 aaKnown RBP11.08□□□□□ -0.64
GPHN-201ENST00000315266 KRBA2Q6ZNG9 492 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
GPHN-201ENST00000315266 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 KCNB2Q92953 911 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 VPS18Q9P253 973 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 PCDHA12Q9UN75 941 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 TMCO5BA8MYB1 307 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 DPEP1P16444 411 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
GPHN-201ENST00000315266 ERMNQ8TAM6 284 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 CAPZA3Q96KX2 299 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 NLRC4Q9NPP4 1024 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 DDX41Q9UJV9 622 aaKnown RBP11.08□□□□□ -0.64
GPHN-201ENST00000315266 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 FAM13AO94988 1023 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 BMP15O95972 392 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 TBC1D8BQ0IIM8 1120 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 ARMCX5Q6P1M9 558 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
GPHN-201ENST00000315266 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
GPHN-201ENST00000315266 TCRBV5S4A2TA0A5A2 114 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 PPP1R12BO60237 982 aaPredicted RBP11.07□□□□□ -0.64
GPHN-201ENST00000315266 CLCN6P51797 869 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 CCZ1BP86790 482 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 CCZ1P86791 482 aaPredicted RBP11.07□□□□□ -0.64
GPHN-201ENST00000315266 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.64
GPHN-201ENST00000315266 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
GPHN-201ENST00000315266 ANKRD7Q92527 254 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
GPHN-201ENST00000315266 MMP1P03956 469 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 DPF2Q92785 391 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 FZD1Q9UP38 647 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 LY75O60449 1722 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 CTAGE15A4D2H0 777 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 CTAGE9A4FU28 777 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 CTAGE8P0CG41 777 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 IL1R1P14778 569 aa11.07□□□□□ -0.64
GPHN-201ENST00000315266 OAS2P29728 719 aaKnown RBP11.07□□□□□ -0.64
GPHN-201ENST00000315266 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms