RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MKRN3Q13064 507 aaKnown RBP28.44■■■□□ 2.14
CDPF1-201ENST00000314567 CKAP2LQ8IYA6 745 aa28.44■■■□□ 2.14
CDPF1-201ENST00000314567 DAGLBQ8NCG7 672 aa28.44■■■□□ 2.14
CDPF1-201ENST00000314567 CCDC12Q8WUD4 166 aaPredicted RBP28.44■■■□□ 2.14
CDPF1-201ENST00000314567 COA7Q96BR5 231 aa28.44■■■□□ 2.14
CDPF1-201ENST00000314567 SLC10A4Q96EP9 437 aa28.44■■■□□ 2.14
CDPF1-201ENST00000314567 BARHL2Q9NY43 387 aa28.44■■■□□ 2.14
CDPF1-201ENST00000314567 CDC37Q16543 378 aaPredicted RBP28.43■■■□□ 2.14
CDPF1-201ENST00000314567 QRICH1Q2TAL8 776 aa28.43■■■□□ 2.14
CDPF1-201ENST00000314567 SASS6Q6UVJ0 657 aa28.43■■■□□ 2.14
CDPF1-201ENST00000314567 MTMR8Q96EF0 704 aa28.43■■■□□ 2.14
CDPF1-201ENST00000314567 PPP1R9BQ96SB3 815 aa28.43■■■□□ 2.14
CDPF1-201ENST00000314567 PCDHA4Q9UN74 947 aa28.43■■■□□ 2.14
CDPF1-201ENST00000314567 C19orf81C9J6K1 198 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 STXBP3O00186 592 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 PFKFB1P16118 471 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 RESP18Q5W5W9 173 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 PCDHB6Q9Y5E3 794 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 hCG_1984214I3L0E3 225 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 TREML2Q5T2D2 321 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 BLIDQ8IZY5 108 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 ZNF713Q8N859 430 aaPredicted RBP28.42■■■□□ 2.14
CDPF1-201ENST00000314567 TIGD1Q96MW7 591 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 HPSEQ9Y251 543 aa28.42■■■□□ 2.14
CDPF1-201ENST00000314567 PNMA6FA0A0J9YX94 578 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 ZBTB5O15062 677 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 PTPREP23469 700 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 C12orf42Q96LP6 360 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 TMOD4Q9NZQ9 345 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 FEM1BQ9UK73 627 aa28.41■■■□□ 2.14
CDPF1-201ENST00000314567 PASKQ96RG2 1323 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 FLOT1O75955 427 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 FKBP1BP68106 108 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 PPIL2Q13356 520 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 SHC4Q6S5L8 630 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 ZNF579Q8NAF0 562 aaKnown RBP28.4■■■□□ 2.14
CDPF1-201ENST00000314567 FBXO2Q9UK22 296 aaPredicted RBP28.4■■■□□ 2.14
CDPF1-201ENST00000314567 PARP14Q460N5 1801 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 CAVIN2O95810 425 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 SH3D19Q5HYK7 790 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 EARS2Q5JPH6 523 aaKnown RBP28.4■■■□□ 2.14
CDPF1-201ENST00000314567 CCDC174Q6PII3 467 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 GADL1Q6ZQY3 521 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 WNK4Q96J92 1243 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 MRVI1Q9Y6F6 885 aa28.4■■■□□ 2.14
CDPF1-201ENST00000314567 YY1P25490 414 aa28.39■■■□□ 2.14
CDPF1-201ENST00000314567 RBM46Q8TBY0 533 aaKnown RBP28.39■■■□□ 2.14
CDPF1-201ENST00000314567 CHURC1Q8WUH1 139 aa28.39■■■□□ 2.14
CDPF1-201ENST00000314567 SRPRBQ9Y5M8 271 aaKnown RBP28.39■■■□□ 2.14
CDPF1-201ENST00000314567 A0A0G2JLL6 359 aaPredicted RBP28.38■■■□□ 2.13
CDPF1-201ENST00000314567 FAM205CA6NFA0 338 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 ZNF202O95125 648 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 NAPAP54920 295 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 PRRT2Q7Z6L0 340 aaPredicted RBP28.38■■■□□ 2.13
CDPF1-201ENST00000314567 FAM200AQ8TCP9 573 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 SLF1Q9BQI6 1058 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 RLFQ13129 1914 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 SYKP43405 635 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 HUNKP57058 714 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 USH1GQ495M9 461 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 NOM1Q5C9Z4 860 aaKnown RBP28.38■■■□□ 2.13
CDPF1-201ENST00000314567 TTC38Q5R3I4 469 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 FAM160B2Q86V87 743 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 SDF4Q9BRK5 362 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 KCNH4Q9UQ05 1017 aa28.38■■■□□ 2.13
CDPF1-201ENST00000314567 SMC1BQ8NDV3 1235 aa28.37■■■□□ 2.13
CDPF1-201ENST00000314567 LOC285556D6RIA3 1793 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 M0R2N6 131 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 PLA2G6O60733 806 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 PIK3AP1Q6ZUJ8 805 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 ZNF784Q8NCA9 323 aaPredicted RBP28.36■■■□□ 2.13
CDPF1-201ENST00000314567 CLIC6Q96NY7 704 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 ZMYND12Q9H0C1 365 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 CXCL11O14625 94 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 ATP2B1P20020 1258 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 MOGSQ13724 837 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 PDLIM2Q96JY6 352 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 RANBP17Q9H2T7 1088 aaKnown RBP28.36■■■□□ 2.13
CDPF1-201ENST00000314567 FAM13BQ9NYF5 915 aa28.36■■■□□ 2.13
CDPF1-201ENST00000314567 ESYT2A0FGR8 921 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 PRPF38AQ8NAV1 312 aaKnown RBP28.35■■■□□ 2.13
CDPF1-201ENST00000314567 RASGRP4Q8TDF6 673 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 FERMT2Q96AC1 680 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 ATG4CQ96DT6 458 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 PPP1R9AQ9ULJ8 1098 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 PCDHA1Q9Y5I3 950 aa28.35■■■□□ 2.13
CDPF1-201ENST00000314567 GNA11P29992 359 aa28.34■■■□□ 2.13
CDPF1-201ENST00000314567 STX1AQ16623 288 aa28.34■■■□□ 2.13
CDPF1-201ENST00000314567 CATSPERGQ6ZRH7 1159 aa28.34■■■□□ 2.13
CDPF1-201ENST00000314567 C6orf50Q9HD87 102 aa28.34■■■□□ 2.13
CDPF1-201ENST00000314567 ANO6Q4KMQ2 910 aa28.34■■■□□ 2.13
CDPF1-201ENST00000314567 CCDC194A0A1B0GVG4 234 aa28.33■■■□□ 2.13
CDPF1-201ENST00000314567 SMCO2A6NFE2 343 aa28.33■■■□□ 2.13
CDPF1-201ENST00000314567 FBXO11Q86XK2 927 aa28.33■■■□□ 2.13
CDPF1-201ENST00000314567 COL11A1P12107 1806 aaPredicted RBP28.33■■■□□ 2.13
CDPF1-201ENST00000314567 UNCXA6NJT0 531 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 PEX10O60683 326 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 ATP2C1P98194 919 aaPredicted RBP28.32■■■□□ 2.12
CDPF1-201ENST00000314567 PPP1R18Q6NYC8 613 aa28.32■■■□□ 2.12
CDPF1-201ENST00000314567 SAPCD2Q86UD0 394 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms