RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 STXBP3O00186 592 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 OPLAHO14841 1288 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 ERCC3P19447 782 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 COPB2P35606 906 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 ANP32AP39687 249 aaKnown RBP14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 CCNA1P78396 465 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 PPP1R18Q6NYC8 613 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 HEATR3Q7Z4Q2 680 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 CLEC4DQ8WXI8 215 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 GPKOWQ92917 476 aaPredicted RBP eCLIP14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 COA7Q96BR5 231 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 AIFM3Q96NN9 605 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 MROH8Q9H579 483 aa14.6□□□□□ -0.07
CHMP2A-201ENST00000312547 GPR25O00155 361 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 HSPA8P11142 646 aaKnown RBP14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 ALAS1P13196 640 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 LBX1P52954 281 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 GHRHRQ02643 423 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 USH1GQ495M9 461 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 MUM1L1Q5H9M0 696 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 FAM177A1Q8N128 213 aaPredicted RBP14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 WASF1Q92558 559 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 TRERF1Q96PN7 1200 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 BEGAINQ9BUH8 593 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 SH3GLB2Q9NR46 395 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 RNF146Q9NTX7 359 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 MRPL11Q9Y3B7 192 aaKnown RBP14.59□□□□□ -0.07
CHMP2A-201ENST00000312547 BAZ2BQ9UIF8 2168 aaKnown RBP14.58□□□□□ -0.07
CHMP2A-201ENST00000312547 ESYT2A0FGR8 921 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 GJB2P29033 226 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 CTCFP49711 727 aaPredicted RBP14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 NCAPG2Q86XI2 1143 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 RGS22Q8NE09 1264 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 MAF1Q9H063 256 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 VPS54Q9P1Q0 977 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 FBXO40Q9UH90 709 aa14.58□□□□□ -0.08
CHMP2A-201ENST00000312547 NFIBO00712 420 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 CTGFP29279 349 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 MAPK4P31152 587 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 SLC4A3P48751 1232 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 NAPAP54920 295 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 LACTBP83111 547 aaPredicted RBP14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 SP3Q02447 781 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 TEX2Q8IWB9 1127 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 ZMYND12Q9H0C1 365 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 HOMER2Q9NSB8 354 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 GJB4Q9NTQ9 266 aa14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
CHMP2A-201ENST00000312547 NPY5RQ15761 445 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 GPR142Q7Z601 462 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 MCF2L2Q86YR7 1114 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 ABRAQ8N0Z2 381 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 SAMD3Q8N6K7 520 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 FAM184AQ8NB25 1140 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 CCDC12Q8WUD4 166 aaPredicted RBP14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 KIF3AQ9Y496 699 aa14.56□□□□□ -0.08
CHMP2A-201ENST00000312547 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 PIK3CDO00329 1044 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 MEIS2O14770 477 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 STRNO43815 780 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 FKTNO75072 461 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 PTPREP23469 700 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 HSD17B4P51659 736 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 CAP1Q01518 475 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 DAGLBQ8NCG7 672 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 CCDC148Q8NFR7 591 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 FBXO18Q8NFZ0 1043 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 ZNF296Q8WUU4 475 aaPredicted RBP14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 PHF20Q9BVI0 1012 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 ARHGAP39Q9C0H5 1083 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 PSTPIP2Q9H939 334 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 A1CFQ9NQ94 594 aaKnown RBP14.55□□□□□ -0.08
CHMP2A-201ENST00000312547 DNAJC25-GNG10A0A024R161 153 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 ADAMTS3O15072 1205 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 HSP90AA1P07900 732 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 XBP1P17861 261 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 BAATQ14032 418 aaPredicted RBP14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 GRB14Q14449 540 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 MORN1Q5T089 497 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 KRT40Q6A162 431 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 GALNT17Q6IS24 598 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 CCAR1Q8IX12 1150 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 USP6NLQ92738 828 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 C8orf76Q96K31 380 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 TRIM47Q96LD4 638 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 GLT8D2Q9H1C3 349 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 MAP3K20Q9NYL2 800 aaKnown RBP14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 CYP39A1Q9NYL5 469 aa14.54□□□□□ -0.08
CHMP2A-201ENST00000312547 KCNJ14Q9UNX9 436 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms