RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ADCY6O43306 1168 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 STRNO43815 780 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 REC8O95072 547 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 CNGA1P29973 690 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 BAATQ14032 418 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 GPATCH4Q5T3I0 446 aaKnown RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 EEPD1Q7L9B9 569 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 U2AF1L4Q8WU68 220 aaKnown RBP14.05□□□□□ -0.16
SCFD1-201ENST00000311943 COL20A1Q9P218 1284 aa14.05□□□□□ -0.16
SCFD1-201ENST00000311943 SNAI1O95863 264 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-201ENST00000311943 CDC27P30260 824 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 ASPRV1Q53RT3 343 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 CATIPQ7Z7H3 387 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 BRF1Q92994 677 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 ACAD9Q9H845 621 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 PAK6Q9NQU5 681 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-201ENST00000311943 FAM217BQ9NTX9 383 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-201ENST00000311943 CYP39A1Q9NYL5 469 aa14.04□□□□□ -0.16
SCFD1-201ENST00000311943 NAP1L2Q9ULW6 460 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-201ENST00000311943 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 CALML3P27482 149 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 LHX8Q68G74 356 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 KLF18A0A0U1RQI7 1052 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 RPS6KB1P23443 525 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 MNX1P50219 401 aaPredicted RBP14.03□□□□□ -0.16
SCFD1-201ENST00000311943 OAZ1P54368 228 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 UBXN2AP68543 259 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 SART3Q15020 963 aaKnown RBP14.03□□□□□ -0.16
SCFD1-201ENST00000311943 HMX1Q9NP08 348 aaPredicted RBP14.03□□□□□ -0.16
SCFD1-201ENST00000311943 RPTORQ8N122 1335 aa14.03□□□□□ -0.16
SCFD1-201ENST00000311943 ZNF236Q9UL36 1845 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 ADAMTS3O15072 1205 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-201ENST00000311943 GJB1P08034 283 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 CYBAP13498 195 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 ADD1P35611 737 aaKnown RBP14.02□□□□□ -0.16
SCFD1-201ENST00000311943 TOB2Q14106 344 aaPredicted RBP14.02□□□□□ -0.16
SCFD1-201ENST00000311943 BLOC1S2Q6QNY1 142 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 ABRAQ8N0Z2 381 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 CHST13Q8NET6 341 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 NCOA5Q9HCD5 579 aaKnown RBP14.02□□□□□ -0.16
SCFD1-201ENST00000311943 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.16
SCFD1-201ENST00000311943 MYH6P13533 1939 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 SGPL1O95470 568 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 HOXA13P31271 388 aaPredicted RBP14.02□□□□□ -0.17
SCFD1-201ENST00000311943 LIFRP42702 1097 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 GJA8P48165 433 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 RPS6P62753 249 aaKnown RBP14.02□□□□□ -0.17
SCFD1-201ENST00000311943 GJC2Q5T442 439 aaPredicted RBP14.02□□□□□ -0.17
SCFD1-201ENST00000311943 NOL8Q76FK4 1167 aaKnown RBP14.02□□□□□ -0.17
SCFD1-201ENST00000311943 FANCBQ8NB91 859 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 TINF2Q9BSI4 451 aa14.02□□□□□ -0.17
SCFD1-201ENST00000311943 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.01□□□□□ -0.17
SCFD1-201ENST00000311943 POTEB2H3BUK9 544 aa14.01□□□□□ -0.17
SCFD1-201ENST00000311943 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
SCFD1-201ENST00000311943 SGMS1Q86VZ5 419 aa14.01□□□□□ -0.17
SCFD1-201ENST00000311943 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
SCFD1-201ENST00000311943 RGS19P49795 217 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
SCFD1-201ENST00000311943 FBXO11Q86XK2 927 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 GPKOWQ92917 476 aaPredicted RBP eCLIP14□□□□□ -0.17
SCFD1-201ENST00000311943 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 ZBTB5O15062 677 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 DDAH1O94760 285 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 STK3Q13188 491 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 MFSD14CQ5VZR4 134 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 TYW1BQ6NUM6 668 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 RUFY3Q7L099 469 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 ARMCX2Q7L311 632 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
SCFD1-201ENST00000311943 KATNBL1Q9H079 304 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 ZHX1Q9UKY1 873 aaPredicted RBP14□□□□□ -0.17
SCFD1-201ENST00000311943 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
SCFD1-201ENST00000311943 MYADML2A6NDP7 307 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 CFBP00751 764 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 FGD1P98174 961 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 FUT2Q10981 343 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 KRT32Q14532 448 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 RNF207Q6ZRF8 634 aa13.99□□□□□ -0.17
SCFD1-201ENST00000311943 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
SCFD1-201ENST00000311943 PAWRQ96IZ0 340 aaKnown RBP13.99□□□□□ -0.17
SCFD1-201ENST00000311943 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
SCFD1-201ENST00000311943 RANBP2P49792 3224 aaKnown RBP13.99□□□□□ -0.17
SCFD1-201ENST00000311943 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
SCFD1-201ENST00000311943 ZBTB43O43298 467 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 PGK1P00558 417 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 FDX1P10109 184 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 NT5C2P49902 561 aa13.98□□□□□ -0.17
SCFD1-201ENST00000311943 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms