RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PDILTQ8N807 584 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 EPAS1Q99814 870 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 LY9Q9HBG7 655 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 SH2B2O14492 632 aaPredicted RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 TLR2O60603 784 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PLA2G6O60733 806 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 TRPA1O75762 1119 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PDHBP11177 359 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 OSBPP22059 807 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 RPS6KB1P23443 525 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 TROAPQ12815 778 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 COG2Q14746 738 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 TAF1CQ15572 869 aaPredicted RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 TMEM67Q5HYA8 995 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 LBX2Q6XYB7 198 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 RUFY3Q7L099 469 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 SGMS1Q86VZ5 419 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PIK3R5Q8WYR1 880 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PARK7Q99497 189 aaKnown RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 BEGAINQ9BUH8 593 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 AGXT2Q9BYV1 514 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 C22orf23Q9BZE7 217 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 KAT14Q9H8E8 782 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 SENP2Q9HC62 589 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 SFMBT1Q9UHJ3 866 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 MYPNQ86TC9 1320 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 CYP2C8P10632 490 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 BMP3P12645 472 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 CPA1P15085 419 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 SLC1A4P43007 532 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 CRHR2Q13324 411 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 HSP90AA2PQ14568 343 aaPredicted RBP9.52□□□□□ -0.89
CHD6-201ENST00000309279 FAM83BQ5T0W9 1011 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 TTC30BQ8N4P2 665 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
CHD6-201ENST00000309279 MAP3K14Q99558 947 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 P2RX7Q99572 595 aaKnown RBP9.52□□□□□ -0.89
CHD6-201ENST00000309279 KIF2CQ99661 725 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 R3HDMLQ9H3Y0 253 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 GPHNQ9NQX3 736 aaPredicted RBP9.52□□□□□ -0.89
CHD6-201ENST00000309279 HOXC10Q9NYD6 342 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 ADAMTS5Q9UNA0 930 aa9.52□□□□□ -0.89
CHD6-201ENST00000309279 TBC1D8O95759 1140 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 CD53P19397 219 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 DSG3P32926 999 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 GCLCP48506 637 aaPredicted RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 EVCP57679 992 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 HERVK_113P62684 666 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 C17orf99Q6UX52 265 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 BTNL9Q6UXG8 535 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 ZNF513Q8N8E2 541 aaPredicted RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 TMC2Q8TDI7 906 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 GTF3C2Q8WUA4 911 aaPredicted RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 NUP88Q99567 741 aaPredicted RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
CHD6-201ENST00000309279 FEM1BQ9UK73 627 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
CHD6-201ENST00000309279 BICDL2A1A5D9 508 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
CHD6-201ENST00000309279 FLOT1O75955 427 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 S100BP04271 92 aaPredicted RBP9.5□□□□□ -0.89
CHD6-201ENST00000309279 BCRP11274 1271 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 STAT2P52630 851 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 ZNF543Q08ER8 600 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 GPATCH4Q5T3I0 446 aaKnown RBP9.5□□□□□ -0.89
CHD6-201ENST00000309279 Q6ZUG5 572 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 RASGRP2Q7LDG7 609 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
CHD6-201ENST00000309279 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
CHD6-201ENST00000309279 TBC1D32Q96NH3 1257 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 FBXO28Q9NVF7 368 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 A0A0G2JMZ2 1700 aa9.5□□□□□ -0.89
CHD6-201ENST00000309279 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 CCDC69A6NI79 296 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 TMEM232C9JQI7 657 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 DDAH1O94760 285 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
CHD6-201ENST00000309279 MAN1A1P33908 653 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 RCAN1P53805 252 aa9.49□□□□□ -0.89
CHD6-201ENST00000309279 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms