RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 BRIP1Q9BX63 1249 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 GOLGA6AQ9NYA3 693 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 IFNAR1P17181 557 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 BCAS4Q8TDM0 211 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
PTPN9-201ENST00000306726 LRWD1Q9UFC0 647 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 CASZ1Q86V15 1759 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 ERFEQ4G0M1 354 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
PTPN9-201ENST00000306726 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 MOCS3O95396 460 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 KRT18P05783 430 aaKnown RBP16.29■□□□□ 0.2
PTPN9-201ENST00000306726 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
PTPN9-201ENST00000306726 NR1I3Q14994 352 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 SLC44A5Q8NCS7 719 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 CTAGE1Q96RT6 745 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 CCDC113Q9H0I3 377 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 GBP3Q9H0R5 595 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 UQCRFS1P1P0C7P4 283 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 ABHD10Q9NUJ1 306 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 HPSEQ9Y251 543 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 MMP10P09238 476 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 TECP42680 631 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 NTRK3Q16288 839 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 TCERG1LQ5VWI1 586 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 TMTC1Q8IUR5 882 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
PTPN9-201ENST00000306726 LPIN2Q92539 896 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
PTPN9-201ENST00000306726 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 SRPRBQ9Y5M8 271 aaKnown RBP16.29■□□□□ 0.2
PTPN9-201ENST00000306726 TACC3Q9Y6A5 838 aa16.29■□□□□ 0.2
PTPN9-201ENST00000306726 GOLGA6BA6NDN3 693 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 ADAMTS3O15072 1205 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 NDUFA10O95299 355 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 BRD3Q15059 726 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 DTHD1Q6ZMT9 781 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 TMEM139Q8IV31 216 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 OR8K1Q8NGG5 319 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 PSMA7O14818 248 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 KRT86O43790 486 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 RPN1P04843 607 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 GNGT1P63211 74 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 DZIP1Q86YF9 867 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 RBM17Q96I25 401 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 EIF3CQ99613 913 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 EXOC1Q9NV70 894 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
PTPN9-201ENST00000306726 LRP5O75197 1615 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 TAX1BP1Q86VP1 789 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 FAM76AQ8TAV0 307 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 KIFC2Q96AC6 838 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 BPIFA3Q9BQP9 254 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
PTPN9-201ENST00000306726 ACTN4O43707 911 aaKnown RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 PDCLQ13371 301 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 ENAHQ8N8S7 591 aaPredicted RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 HDAC7Q8WUI4 952 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 LACRTQ9GZZ8 138 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 KLRG2A4D1S0 409 aaPredicted RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 USP17L3A6NCW0 530 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 USP17L4A6NCW7 530 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 KIAA0754O94854 1291 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 BEND6Q5SZJ8 279 aaPredicted RBP16.27■□□□□ 0.2
PTPN9-201ENST00000306726 USP17L1Q7RTZ2 530 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 ADGRA1Q86SQ6 560 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
PTPN9-201ENST00000306726 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 DDR1Q08345 913 aa16.27■□□□□ 0.19
PTPN9-201ENST00000306726 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 MS4A14Q96JA4 679 aa16.27■□□□□ 0.19
PTPN9-201ENST00000306726 ZSCAN10Q96SZ4 725 aaPredicted RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.19
PTPN9-201ENST00000306726 MROH5Q6ZUA9 1318 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 NDUFAB1O14561 156 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 FCER1AP12319 257 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 TFAP4Q01664 338 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 PPANQ9NQ55 473 aaKnown RBP16.26■□□□□ 0.19
PTPN9-201ENST00000306726 FTCDO95954 541 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 USP17L8P0C7I0 530 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 RASSF7Q02833 373 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 NAA35Q5VZE5 725 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 FBXW10Q5XX13 1052 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 ANKRD18AQ8IVF6 992 aa16.26■□□□□ 0.19
PTPN9-201ENST00000306726 ANKIB1Q9P2G1 1089 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms