RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 MINDY4BA8MYZ0 360 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 RRP9O43818 475 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 TPM3P06753 285 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 PGK2P07205 417 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 EEF2P13639 858 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 ATL3Q6DD88 541 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 STOX1Q6ZVD7 989 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 SPATA32Q96LK8 384 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 PUS7LQ9H0K6 701 aaKnown RBP9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 PRDM5Q9NQX1 630 aaPredicted RBP9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 PRKAG2Q9UGJ0 569 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 TMX2Q9Y320 296 aa9.03□□□□□ -0.96
TM4SF1-201ENST00000305366 PHIPQ8WWQ0 1821 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 RNF113AO15541 343 aaKnown RBP9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 STRNO43815 780 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 JAK2O60674 1132 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 ZFYP08048 801 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 FCER1AP12319 257 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 LIG1P18858 919 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 SCRN1Q12765 414 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 STK3Q13188 491 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 TMEM132BQ14DG7 1078 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 FAM83BQ5T0W9 1011 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 CTR9Q6PD62 1173 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 FERMT3Q86UX7 667 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 TEX2Q8IWB9 1127 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 NSUN7Q8NE18 718 aaKnown RBP9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 LPAR1Q92633 364 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 BRF1Q92994 677 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 ZNF274Q96GC6 653 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 NUP88Q99567 741 aaPredicted RBP9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 VCPKMTQ9H867 229 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 MKNK2Q9HBH9 465 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 CFAP45Q9UL16 551 aa9.02□□□□□ -0.97
TM4SF1-201ENST00000305366 DLL1O00548 723 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 APPP05067 770 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 HOXC6P09630 235 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 HSPD1P10809 573 aaKnown RBP9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 ADCYAP1R1P41586 468 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 EVCP57679 992 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 RTP1P59025 263 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 ARRDC4Q8NCT1 418 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 CCDC17Q96LX7 622 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 MMP19Q99542 508 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 SLC5A4Q9NY91 659 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 KBTBD13C9JR72 458 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 E7EWF7 191 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 MSCO60682 206 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 DTNBO60941 627 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 PRDM1O75626 825 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 CAVIN2O95810 425 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 CYBAP13498 195 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 TYRO3Q06418 890 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 UBE3CQ15386 1083 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 ZSCAN25Q6NSZ9 544 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 FAM173BQ6P4H8 233 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 C16orf86Q6ZW13 317 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 MB21D1Q8N884 522 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 TNMDQ9H2S6 317 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 MROH8Q9H579 483 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 KANSL2Q9H9L4 492 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 PRDM16Q9HAZ2 1276 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 DACT1Q9NYF0 836 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 CTDP1Q9Y5B0 961 aaPredicted RBP9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
TM4SF1-201ENST00000305366 LAMA4Q16363 1823 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 H3BQV1 296 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 DNM1LO00429 736 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 WDR46O15213 610 aaKnown RBP9□□□□□ -0.97
TM4SF1-201ENST00000305366 CTDNEP1O95476 244 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 PGK1P00558 417 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 TAL1P17542 331 aaPredicted RBP9□□□□□ -0.97
TM4SF1-201ENST00000305366 ADD1P35611 737 aaKnown RBP9□□□□□ -0.97
TM4SF1-201ENST00000305366 STAT3P40763 770 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 KCTD2Q14681 263 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 LRIT3Q3SXY7 679 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 TRIM60Q495X7 471 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 FAM47AQ5JRC9 791 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 OLFML2BQ68BL8 750 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 SASS6Q6UVJ0 657 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 SLC39A5Q6ZMH5 540 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 CPXCR1Q8N123 301 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 SHCBP1Q8NEM2 672 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 MAML3Q96JK9 1138 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 PGBD1Q96JS3 809 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 STRBPQ96SI9 672 aaKnown RBP9□□□□□ -0.97
TM4SF1-201ENST00000305366 GOPCQ9HD26 462 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms