RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TRPA1O75762 1119 aa31.27■■■□□ 2.6
HDAC3-201ENST00000305264 C17orf99Q6UX52 265 aa31.27■■■□□ 2.6
HDAC3-201ENST00000305264 RIOX2Q8IUF8 465 aa31.27■■■□□ 2.6
HDAC3-201ENST00000305264 KIF3AQ9Y496 699 aa31.27■■■□□ 2.6
HDAC3-201ENST00000305264 RBBP6Q7Z6E9 1792 aaKnown RBP31.27■■■□□ 2.6
HDAC3-201ENST00000305264 ABCB11O95342 1321 aa31.27■■■□□ 2.6
HDAC3-201ENST00000305264 TBC1D8O95759 1140 aa31.26■■■□□ 2.59
HDAC3-201ENST00000305264 MUM1L1Q5H9M0 696 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 C8orf76Q96K31 380 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 TRERF1Q96PN7 1200 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 RNF146Q9NTX7 359 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 PNMA2Q9UL42 364 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 KCNJ14Q9UNX9 436 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 OPLAHO14841 1288 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 GUCY1B3Q02153 619 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 PPP1R18Q6NYC8 613 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 PORCNQ9H237 461 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 SH3GLB2Q9NR46 395 aa31.25■■■□□ 2.59
HDAC3-201ENST00000305264 TRAF1Q13077 416 aa31.24■■■□□ 2.59
HDAC3-201ENST00000305264 CLEC4DQ8WXI8 215 aa31.24■■■□□ 2.59
HDAC3-201ENST00000305264 NFIBO00712 420 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 ERCC3P19447 782 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 NCAPG2Q86XI2 1143 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 CFHR5Q9BXR6 569 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 MRPL11Q9Y3B7 192 aaKnown RBP31.23■■■□□ 2.59
HDAC3-201ENST00000305264 LARP1BQ659C4 914 aaKnown RBP31.23■■■□□ 2.59
HDAC3-201ENST00000305264 KRT40Q6A162 431 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 CCDC148Q8NFR7 591 aa31.23■■■□□ 2.59
HDAC3-201ENST00000305264 XBP1P17861 261 aa31.22■■■□□ 2.59
HDAC3-201ENST00000305264 CCDC12Q8WUD4 166 aaPredicted RBP31.22■■■□□ 2.59
HDAC3-201ENST00000305264 PHF20Q9BVI0 1012 aa31.22■■■□□ 2.59
HDAC3-201ENST00000305264 EFCC1Q9HA90 598 aa31.22■■■□□ 2.59
HDAC3-201ENST00000305264 ADAMTS3O15072 1205 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 SLC25A27O95847 323 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 CCNA1P78396 465 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 TKFCQ3LXA3 575 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 FBXO18Q8NFZ0 1043 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 ZMYND12Q9H0C1 365 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 SMCO2A6NFE2 343 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 SYT1P21579 422 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 NLRP5P59047 1200 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 MAP2K1Q02750 393 aaPredicted RBP31.21■■■□□ 2.59
HDAC3-201ENST00000305264 TRIM29Q14134 588 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 NPY5RQ15761 445 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 ACAD9Q9H845 621 aa31.21■■■□□ 2.59
HDAC3-201ENST00000305264 CWC22Q9HCG8 908 aaKnown RBP31.21■■■□□ 2.59
HDAC3-201ENST00000305264 ESYT2A0FGR8 921 aa31.2■■■□□ 2.59
HDAC3-201ENST00000305264 SHCBP1Q8NEM2 672 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 CHST13Q8NET6 341 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 TBC1D5Q92609 795 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 ZSWIM8A7E2V4 1837 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 PLXNB2O15031 1838 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 PDCP20941 246 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 ADCY7P51828 1080 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 WDR78Q5VTH9 848 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 PSTPIP2Q9H939 334 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 SAGE1Q9NXZ1 904 aa31.19■■■□□ 2.58
HDAC3-201ENST00000305264 MMP1P03956 469 aa31.18■■■□□ 2.58
HDAC3-201ENST00000305264 COPB2P35606 906 aa31.18■■■□□ 2.58
HDAC3-201ENST00000305264 RIC8AQ9NPQ8 531 aa31.18■■■□□ 2.58
HDAC3-201ENST00000305264 ECM2O94769 699 aaPredicted RBP31.17■■■□□ 2.58
HDAC3-201ENST00000305264 FAM177A1Q8N128 213 aaPredicted RBP31.17■■■□□ 2.58
HDAC3-201ENST00000305264 CUL5Q93034 780 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 MROH8Q9H579 483 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 C6orf50Q9HD87 102 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 H3BQV1 296 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 IFFO2Q5TF58 517 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 FBXO40Q9UH90 709 aa31.17■■■□□ 2.58
HDAC3-201ENST00000305264 MGAMO43451 1857 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 VPS37CA5D8V6 355 aaPredicted RBP31.16■■■□□ 2.58
HDAC3-201ENST00000305264 CFBP00751 764 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 UBE2SQ16763 222 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 USP17L6PQ6QN14 398 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 NSMFQ6X4W1 530 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 A1CFQ9NQ94 594 aaKnown RBP31.16■■■□□ 2.58
HDAC3-201ENST00000305264 PCDHA4Q9UN74 947 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 LCTP09848 1927 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 HOXA13P31271 388 aaPredicted RBP31.16■■■□□ 2.58
HDAC3-201ENST00000305264 DDIT3P35638 169 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 PKP1Q13835 747 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 OXER1Q8TDS5 423 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 WBP1LQ9NX94 342 aa31.16■■■□□ 2.58
HDAC3-201ENST00000305264 MEIS2O14770 477 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 STX6O43752 255 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 CALML3P27482 149 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 GNA11P29992 359 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 SLC30A10Q6XR72 485 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 CCAR1Q8IX12 1150 aaKnown RBP31.15■■■□□ 2.58
HDAC3-201ENST00000305264 DAGLBQ8NCG7 672 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 BEGAINQ9BUH8 593 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 TSKSQ9UJT2 592 aa31.15■■■□□ 2.58
HDAC3-201ENST00000305264 MCF2L2Q86YR7 1114 aa31.14■■■□□ 2.58
HDAC3-201ENST00000305264 RASGRP4Q8TDF6 673 aa31.14■■■□□ 2.58
HDAC3-201ENST00000305264 MAPK4P31152 587 aa31.14■■■□□ 2.57
HDAC3-201ENST00000305264 DIS3L2Q8IYB7 885 aaKnown RBP31.14■■■□□ 2.57
HDAC3-201ENST00000305264 BLIDQ8IZY5 108 aa31.14■■■□□ 2.57
HDAC3-201ENST00000305264 DOCK3Q8IZD9 2030 aa31.14■■■□□ 2.57
HDAC3-201ENST00000305264 HSD17B4P51659 736 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 MRPL12P52815 198 aaKnown RBP31.13■■■□□ 2.57
HDAC3-201ENST00000305264 RPS6P62753 249 aaKnown RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms