RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CAPN7Q9Y6W3 813 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 TEKT3Q9BXF9 490 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 A0A087WWV3 80 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 PTPN21Q16825 1174 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 PLA2G4DQ86XP0 818 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 SMYD4Q8IYR2 804 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 GJA10Q969M2 543 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 MAGEF1Q9HAY2 307 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 PDE11AQ9HCR9 933 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 TACC3Q9Y6A5 838 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 EHHADHQ08426 723 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 KRT81Q14533 505 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 CUL4AQ13619 759 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 UHMK1Q8TAS1 419 aaKnown RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 MED4Q9NPJ6 270 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 KLHL14Q9P2G3 628 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 KDM5CP41229 1560 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 ENC1O14682 589 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 YARSP54577 528 aaKnown RBP15.28■□□□□ 0.04
PRKCB-201ENST00000303531 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 FAM71BQ8TC56 605 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 NSMCE1Q8WV22 266 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
PRKCB-201ENST00000303531 STAM2O75886 525 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 PHBP35232 272 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 RASSF2P50749 326 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 GUCY2DQ02846 1103 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 SEPT6Q14141 434 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 CAPN12Q6ZSI9 719 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 RNF10Q8N5U6 811 aaKnown RBP15.27■□□□□ 0.04
PRKCB-201ENST00000303531 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 RBL2Q08999 1139 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 BCAS4Q8TDM0 211 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 LARSQ9P2J5 1176 aaKnown RBP15.27■□□□□ 0.04
PRKCB-201ENST00000303531 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRKCB-201ENST00000303531 NACA2Q9H009 215 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.04
PRKCB-201ENST00000303531 TXNDC9O14530 226 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 SLFN13Q68D06 897 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 SCYL2Q6P3W7 929 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 RABGGTAQ92696 567 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 IKBKBO14920 756 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 THAP12O43422 761 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.27■□□□□ 0.03
PRKCB-201ENST00000303531 RASGRP4Q8TDF6 673 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 SLC12A2P55011 1212 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 NAA35Q5VZE5 725 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 NUF2Q9BZD4 464 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 MLXIPQ9HAP2 919 aa15.27■□□□□ 0.03
PRKCB-201ENST00000303531 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 KIF23Q02241 960 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 POLA2Q14181 598 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 CCDC38Q502W7 563 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 SAMD9Q5K651 1589 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 HADHQ16836 314 aaKnown RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 MAGI3Q5TCQ9 1506 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 CLASP1Q7Z460 1538 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 LAD1O00515 517 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 TRAPPC10P48553 1259 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 GRAMD1CQ8IYS0 662 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 LARP4BQ92615 738 aaKnown RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 VCXQ9H320 206 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 ZBTB8OSQ8IWT0 167 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 MIPOL1Q8TD10 442 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 CASQ2O14958 399 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 LINC00301Q8NCQ3 95 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 DMP1Q13316 513 aaPredicted RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 CACTINQ8WUQ7 758 aaKnown RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 RIOK1Q9BRS2 568 aaKnown RBP15.26■□□□□ 0.03
PRKCB-201ENST00000303531 USP21Q9UK80 565 aa15.26■□□□□ 0.03
PRKCB-201ENST00000303531 TACO1Q9BSH4 297 aaKnown RBP15.25■□□□□ 0.03
PRKCB-201ENST00000303531 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 M0QZ92 97 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 SEC31AO94979 1220 aaKnown RBP15.25■□□□□ 0.03
PRKCB-201ENST00000303531 TNNC2P02585 160 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
PRKCB-201ENST00000303531 AS3MTQ9HBK9 375 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
PRKCB-201ENST00000303531 ADD2P35612 726 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms