RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 DUSP10Q9Y6W6 482 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 BACH1O14867 736 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 VPS41P49754 854 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 ADCY7P51828 1080 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 SEPT7Q16181 437 aaKnown RBP14.74□□□□□ -0.05
CASC4-201ENST00000299957 TMEM260Q9NX78 707 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 UTYO14607 1347 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 GOLGA6L10A0A0M3HER8 536 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 PABPC4Q13310 644 aaKnown RBP eCLIP14.74□□□□□ -0.05
CASC4-201ENST00000299957 PRR16Q569H4 304 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 TMTC3Q6ZXV5 915 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 CCDC51Q96ER9 411 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 ZNF446Q9NWS9 450 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 KIAA1024Q9UPX6 916 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 PALLDQ8WX93 1383 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 CETN3O15182 167 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 FAM13AO94988 1023 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 IL6STP40189 918 aaPredicted RBP14.74□□□□□ -0.05
CASC4-201ENST00000299957 SLC1A4P43007 532 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 BTDP43251 543 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
CASC4-201ENST00000299957 SFMBT2Q5VUG0 894 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 GPBP1Q86WP2 473 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 CCDC65Q8IXS2 484 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 P2RX5Q93086 422 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 PANX2Q96RD6 677 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 SELENOOQ9BVL4 669 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 PCDHA12Q9UN75 941 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 FHOD1Q9Y613 1164 aa14.74□□□□□ -0.05
CASC4-201ENST00000299957 CLTCQ00610 1675 aaKnown RBP14.73□□□□□ -0.05
CASC4-201ENST00000299957 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
CASC4-201ENST00000299957 GCNT3O95395 438 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 CACNB3P54284 484 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 TXNRD1Q16881 649 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 NFRKBQ6P4R8 1299 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 KRT25Q7Z3Z0 450 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 MGARPQ8TDB4 240 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 TBC1D5Q92609 795 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 SFI1A8K8P3 1242 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 ASIC2Q16515 512 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 SGMS1Q86VZ5 419 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 U2AF1L4Q8WU68 220 aaKnown RBP14.73□□□□□ -0.05
CASC4-201ENST00000299957 STAG1Q8WVM7 1258 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 PNKPQ96T60 521 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 BPIFA3Q9BQP9 254 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 DISC1Q9NRI5 854 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 CAPN7Q9Y6W3 813 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 CLIC2O15247 247 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 CFBP00751 764 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 GYPCP04921 128 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 MRPL12P52815 198 aaKnown RBP14.73□□□□□ -0.05
CASC4-201ENST00000299957 CFAP221Q4G0U5 840 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 FAM133AQ8N9E0 248 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 GOLGA5Q8TBA6 731 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 ANKRD2Q9GZV1 360 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 HYOU1Q9Y4L1 999 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 ZNF804BA4D1E1 1349 aa14.73□□□□□ -0.05
CASC4-201ENST00000299957 CYP19A1P11511 503 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 VEGFAP15692 232 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 CYP2J2P51589 502 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 PDCLQ13371 301 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 RPS6KA1Q15418 735 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 KRT71Q3SY84 523 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 KCNK9Q9NPC2 374 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 ECM2O94769 699 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 VIMP08670 466 aaKnown RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 KLRK1P26718 216 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 GGCXP38435 758 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 MAP3K9P80192 1104 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 PPP2R5BQ15173 497 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 CCDC121Q6ZUS5 278 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 CAPS2Q9BXY5 557 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 VEZTQ9HBM0 779 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 PCDHA4Q9UN74 947 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 SORBS3O60504 671 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 BMP6P22004 513 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 LONP1P36776 959 aaKnown RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 TNNC1P63316 161 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 EVX2Q03828 476 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 RASGRP2Q7LDG7 609 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 CCDC84Q86UT8 332 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 TPH2Q8IWU9 490 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 MYOCDQ8IZQ8 938 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 TRIM58Q8NG06 486 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 SH3RF3Q8TEJ3 882 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 NUP58Q9BVL2 599 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 MYO1AQ9UBC5 1043 aa14.72□□□□□ -0.05
CASC4-201ENST00000299957 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
CASC4-201ENST00000299957 TBC1D8O95759 1140 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
CASC4-201ENST00000299957 RBM26Q5T8P6 1007 aaKnown RBP14.71□□□□□ -0.05
CASC4-201ENST00000299957 PEX26Q7Z412 305 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 KIAA0825Q8IV33 1275 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 SLF2Q8IX21 1173 aa14.71□□□□□ -0.05
CASC4-201ENST00000299957 DCP1AQ9NPI6 582 aaPredicted RBP14.71□□□□□ -0.05
CASC4-201ENST00000299957 RWDD2AQ9UIY3 292 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms