RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 DMP1Q13316 513 aaPredicted RBP14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FTOQ9C0B1 505 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ABCF3Q9NUQ8 709 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CCPG1Q9ULG6 757 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FIS1Q9Y3D6 152 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ICA1Q05084 483 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ARMCX3Q9UH62 379 aaPredicted RBP14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PYCARDQ9ULZ3 195 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CD2APQ9Y5K6 639 aa14.87□□□□□ -0.03
CHRFAM7A-201ENST00000299847 OPHN1O60890 802 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TRIM58Q8NG06 486 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 VCXQ9H320 206 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CPSF2Q9P2I0 782 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PRAMEF22A3QJZ6 481 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CLIC2O15247 247 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ATF2P15336 505 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MYL7Q01449 175 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RBBP5Q15291 538 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZBTB8OSQ8IWT0 167 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 H7C0C1 242 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CXCR5P32302 372 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ATP5OP48047 213 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 C2orf54Q08AI8 447 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PROSER3Q2NL68 480 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RSPH3Q86UC2 560 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MCUQ8NE86 351 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF653Q96CK0 615 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 USP44Q9H0E7 712 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PCDHB4Q9Y5E5 795 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RNF40O75150 1001 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GDF11O95390 407 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 DYNLT1P63172 113 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GUCY2DQ02846 1103 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GNPTABQ3T906 1256 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ARHGAP24Q8N264 748 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PARP2Q9UGN5 583 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SGK1O00141 431 aa14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 DACT3Q96B18 629 aaPredicted RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CNOT6LQ96LI5 555 aaKnown RBP14.86□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PFKFB2O60825 505 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CASP14P31944 242 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ARHGAP25P42331 645 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 IFNAR2P48551 515 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 LIG3P49916 1009 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SLC12A1Q13621 1099 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 USPL1Q5W0Q7 1092 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF148Q9UQR1 794 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 HADHQ16836 314 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MED23Q9ULK4 1368 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PPP1R12AO14974 1030 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TMEM191BP0C7N4 346 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PHBP35232 272 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ECE1P42892 770 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 FAM193BQ96PV7 902 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PALM3A6NDB9 673 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 WDR46O15213 610 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 BFSP1Q12934 665 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 MAIP1Q8WWC4 291 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RABGAP1Q9Y3P9 1069 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 LRRN2O75325 713 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 YWHAEP62258 255 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 WHAMMP3Q1A5X7 153 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CCDC38Q502W7 563 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SLFN12Q8IYM2 578 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CACYBPQ9HB71 228 aaKnown RBP14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 AS3MTQ9HBK9 375 aa14.85□□□□□ -0.03
CHRFAM7A-201ENST00000299847 YWHAGP61981 247 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 SLFN13Q68D06 897 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 P3H4Q92791 437 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PDE11AQ9HCR9 933 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RBL2Q08999 1139 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 JADE1Q6IE81 842 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 PRPF31Q8WWY3 499 aaKnown RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 HDAC11Q96DB2 347 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CHMP6Q96FZ7 201 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TRIM56Q9BRZ2 755 aaKnown RBP14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RCN2Q14257 317 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZBTB33Q86T24 672 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 GPR162Q16538 588 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 RAPH1Q70E73 1250 aa14.84□□□□□ -0.03
CHRFAM7A-201ENST00000299847 TBC1D22AQ8WUA7 517 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms