RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 SBF1O95248 1867 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 STAMQ92783 540 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 PCDHA1Q9Y5I3 950 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 POLR2AP24928 1970 aaKnown RBP27.43■■□□□ 1.98
SHISA5-201ENST00000296444 PLCB2Q00722 1185 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 MDM2Q00987 491 aaPredicted RBP27.43■■□□□ 1.98
SHISA5-201ENST00000296444 DPCR1Q3MIW9 517 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 KRBA2Q6ZNG9 492 aa27.43■■□□□ 1.98
SHISA5-201ENST00000296444 REXO1Q8N1G1 1221 aaKnown RBP27.43■■□□□ 1.98
SHISA5-201ENST00000296444 ZKSCAN4Q969J2 545 aaPredicted RBP27.43■■□□□ 1.98
SHISA5-201ENST00000296444 CCNT1O60563 726 aaKnown RBP27.42■■□□□ 1.98
SHISA5-201ENST00000296444 ADCY7P51828 1080 aa27.42■■□□□ 1.98
SHISA5-201ENST00000296444 PRR12Q9ULL5 1215 aa27.42■■□□□ 1.98
SHISA5-201ENST00000296444 GNA11P29992 359 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 TRAPPC10P48553 1259 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 DHX58Q96C10 678 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 GGA3Q9NZ52 723 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 RNF181Q9P0P0 153 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 PRKG1Q13976 671 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 ZNF579Q8NAF0 562 aaKnown RBP27.41■■□□□ 1.98
SHISA5-201ENST00000296444 CNNM3Q8NE01 707 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 TBC1D5Q92609 795 aa27.41■■□□□ 1.98
SHISA5-201ENST00000296444 H7C1D1 291 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 OPLAHO14841 1288 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 ACTN4O43707 911 aaKnown RBP27.4■■□□□ 1.98
SHISA5-201ENST00000296444 TDP2O95551 362 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 ZNF165P49910 485 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 NONOQ15233 471 aaKnown RBP eCLIP27.4■■□□□ 1.98
SHISA5-201ENST00000296444 SYDE2Q5VT97 1194 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 GALNT17Q6IS24 598 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 ZNF341Q9BYN7 854 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 CTAGE5O15320 804 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 BMP6P22004 513 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 TNNI2P48788 182 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 FAM200AQ8TCP9 573 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 LRRC15Q8TF66 581 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 PSTPIP2Q9H939 334 aa27.4■■□□□ 1.98
SHISA5-201ENST00000296444 SLC37A4O43826 429 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 GPC2Q8N158 579 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 CCDC12Q8WUD4 166 aaPredicted RBP27.39■■□□□ 1.98
SHISA5-201ENST00000296444 PLIN2Q99541 437 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 ARHGEF10LQ9HCE6 1279 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 RIC8AQ9NPQ8 531 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 PCDHA5Q9Y5H7 936 aa27.39■■□□□ 1.98
SHISA5-201ENST00000296444 ESYT2A0FGR8 921 aa27.38■■□□□ 1.97
SHISA5-201ENST00000296444 CLK2P49760 499 aaKnown RBP27.38■■□□□ 1.97
SHISA5-201ENST00000296444 POTEDQ86YR6 584 aa27.38■■□□□ 1.97
SHISA5-201ENST00000296444 IQCB1Q15051 598 aa27.38■■□□□ 1.97
SHISA5-201ENST00000296444 KIFC2Q96AC6 838 aa27.38■■□□□ 1.97
SHISA5-201ENST00000296444 KRT25Q7Z3Z0 450 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 MEIS2O14770 477 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 AFMP43652 599 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 CCDC174Q6PII3 467 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 NEK8Q86SG6 692 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 VCPKMTQ9H867 229 aa27.37■■□□□ 1.97
SHISA5-201ENST00000296444 PPP4R3BQ5MIZ7 849 aa27.36■■□□□ 1.97
SHISA5-201ENST00000296444 TIGD1Q96MW7 591 aa27.36■■□□□ 1.97
SHISA5-201ENST00000296444 MTRQ99707 1265 aa27.36■■□□□ 1.97
SHISA5-201ENST00000296444 HOXA13P31271 388 aaPredicted RBP27.36■■□□□ 1.97
SHISA5-201ENST00000296444 TNFAIP1Q13829 316 aa27.36■■□□□ 1.97
SHISA5-201ENST00000296444 FERMT2Q96AC1 680 aa27.36■■□□□ 1.97
SHISA5-201ENST00000296444 ASNSP08243 561 aa27.35■■□□□ 1.97
SHISA5-201ENST00000296444 KARSQ15046 597 aaKnown RBP27.35■■□□□ 1.97
SHISA5-201ENST00000296444 C9orf131Q5VYM1 1079 aa27.35■■□□□ 1.97
SHISA5-201ENST00000296444 BTNL9Q6UXG8 535 aa27.35■■□□□ 1.97
SHISA5-201ENST00000296444 DHX40Q8IX18 779 aaKnown RBP27.35■■□□□ 1.97
SHISA5-201ENST00000296444 CCDC94Q9BW85 323 aaPredicted RBP27.35■■□□□ 1.97
SHISA5-201ENST00000296444 ADCY5O95622 1261 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 STAT2P52630 851 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 STX1AQ16623 288 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 MYRIPQ8NFW9 859 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 PRIMPOLQ96LW4 560 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 ZRSR1Q15695 479 aaKnown RBP27.34■■□□□ 1.97
SHISA5-201ENST00000296444 CUL5Q93034 780 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 TUBE1Q9UJT0 475 aa27.34■■□□□ 1.97
SHISA5-201ENST00000296444 FBXO11Q86XK2 927 aa27.33■■□□□ 1.97
SHISA5-201ENST00000296444 MYH7BA7E2Y1 1941 aa27.33■■□□□ 1.96
SHISA5-201ENST00000296444 DICER1Q9UPY3 1922 aaKnown RBP27.33■■□□□ 1.96
SHISA5-201ENST00000296444 E2F4Q16254 413 aa27.33■■□□□ 1.96
SHISA5-201ENST00000296444 GOPCQ9HD26 462 aa27.33■■□□□ 1.96
SHISA5-201ENST00000296444 MORC2Q9Y6X9 1032 aaPredicted RBP27.33■■□□□ 1.96
SHISA5-201ENST00000296444 TECP42680 631 aa27.32■■□□□ 1.96
SHISA5-201ENST00000296444 UVSSAQ2YD98 709 aa27.32■■□□□ 1.96
SHISA5-201ENST00000296444 ZFP91Q96JP5 570 aaPredicted RBP27.32■■□□□ 1.96
SHISA5-201ENST00000296444 FEZ1Q99689 392 aa27.32■■□□□ 1.96
SHISA5-201ENST00000296444 ATAD5Q96QE3 1844 aa27.32■■□□□ 1.96
SHISA5-201ENST00000296444 hCG_1984214I3L0E3 225 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 PTMAP06454 111 aaKnown RBP27.31■■□□□ 1.96
SHISA5-201ENST00000296444 POSTNQ15063 836 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 UTP14CQ5TAP6 766 aaKnown RBP27.31■■□□□ 1.96
SHISA5-201ENST00000296444 ZNF713Q8N859 430 aaPredicted RBP27.31■■□□□ 1.96
SHISA5-201ENST00000296444 AMNQ9BXJ7 453 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 SSC5DA1L4H1 1573 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 BMP15O95972 392 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 MTMR2Q13614 643 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 DTHD1Q6ZMT9 781 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 WRNIP1Q96S55 665 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 BLZF1Q9H2G9 400 aa27.31■■□□□ 1.96
SHISA5-201ENST00000296444 NEMFO60524 1076 aa27.3■■□□□ 1.96
SHISA5-201ENST00000296444 TXKP42681 527 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms